RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 RAB42Q8N4Z0 105 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 GOLM1Q8NBJ4 401 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 ZNF740Q8NDX6 193 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 ZNF480Q8WV37 535 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 HAUS1Q96CS2 278 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 PACSIN1Q9BY11 444 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 ANGPTL4Q9BY76 406 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 TMPRSS13Q9BYE2 586 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 PRDM14Q9GZV8 571 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 L2HGDHQ9H9P8 463 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 SPTLC3Q9NUV7 552 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 TMEM160Q9NX00 188 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 NDRG3Q9UGV2 375 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 CADP27708 2225 aa8.11□□□□□ -1.11
TRAPPC9-212ENST00000521944 OVOL3O00110 214 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 KIF5CO60282 957 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 ZFAND5O76080 213 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 SLC16A8O95907 504 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 GOT2P00505 430 aaKnown RBP8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 PLAUP00749 431 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 KRT1P04264 644 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 ACVR1BP36896 505 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 HK2P52789 917 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 PNLIPRP1P54315 467 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 MEF2AQ02078 507 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 TSTA3Q13630 321 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 ARHGAP19Q14CB8 494 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 FAM174BQ3ZCQ3 159 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 ANKRD20A2Q5SQ80 823 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 ANKRD20A1Q5TYW2 823 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 ANKRD20A3Q5VUR7 823 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 VASNQ6EMK4 673 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 ALKBH5Q6P6C2 394 aaKnown RBP8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 NXPE4Q6UWF7 544 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 BZW1Q7L1Q6 419 aaKnown RBP8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 ZNF321PQ8N8H1 164 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 TMEM171Q8WVE6 324 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 ANKRD9Q96BM1 317 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 NTNG2Q96CW9 530 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 HSPBAP1Q96EW2 488 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 VMP1Q96GC9 406 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 C1orf159Q96HA4 380 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 WDYHV1Q96HA8 205 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 SGCZQ96LD1 299 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 ZNF778Q96MU6 729 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 TRIB1Q96RU8 372 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 SGPP1Q9BX95 441 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 P2RY12Q9H244 342 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 ESRP2Q9H6T0 727 aaKnown RBP8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 CALHM2Q9HA72 323 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 SACM1LQ9NTJ5 587 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 CTTNBP2NLQ9P2B4 639 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 MARCH4Q9P2E8 410 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 GALPQ9UBC7 116 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 STOML1Q9UBI4 398 aa8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 FEZ2Q9UHY8 353 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 AAR2Q9Y312 384 aaKnown RBP8.1□□□□□ -1.11
TRAPPC9-212ENST00000521944 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 C15orf38-AP3S2A0A0A6YYH1 394 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 CTAGE15A4D2H0 777 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 ANKRD33BA6NCL7 494 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 NDUFS7O75251 213 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 PSIP1O75475 530 aaKnown RBP8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 TNFSF13O75888 250 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 TMIGD3P0DMS9 266 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 JAK1P23458 1154 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 RPS15AP62244 130 aaKnown RBP8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 ABATP80404 500 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 TERF2Q15554 542 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 P3H1Q32P28 736 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 DEFB134Q4QY38 66 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 ANKRD20A4Q4UJ75 823 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 LRRC38Q5VT99 294 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 ASPGQ86U10 573 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 CTAGE6Q86UF2 777 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 MEX3DQ86XN8 651 aaKnown RBP8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 CCDC50Q8IVM0 306 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 RASGEF1CQ8N431 466 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 LIX1Q8N485 282 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 ZNF441Q8N8Z8 693 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 FBXO15Q8NCQ5 510 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 SKA2Q8WVK7 121 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 SLC13A3Q8WWT9 602 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 P3H4Q92791 437 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 PDLIM2Q96JY6 352 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 SLCO5A1Q9H2Y9 848 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 CXorf56Q9H5V9 222 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 ZFP64Q9NPA5 681 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 ABCF3Q9NUQ8 709 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 TMEM184CQ9NVA4 438 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 UTP6Q9NYH9 597 aaKnown RBP8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 PSD3Q9NYI0 1048 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 UVRAGQ9P2Y5 699 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 ZNF281Q9Y2X9 895 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 HYOU1Q9Y4L1 999 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 RYR3Q15413 4870 aa8.09□□□□□ -1.11
TRAPPC9-212ENST00000521944 HACD1B0YJ81 288 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 PRMT5O14744 637 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms