RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 C1QTNF1Q9BXJ1 281 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 HEMGNQ9BXL5 484 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 FRMD8P1Q9BZ68 369 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 NUF2Q9BZD4 464 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 CARD9Q9H257 536 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 TMEM245Q9H330 911 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 PDFQ9HBH1 243 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 BPIFA1Q9NP55 256 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 NOX4Q9NPH5 578 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 TAS2R10Q9NYW0 307 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 DLGAP2Q9P1A6 1054 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 UBA2Q9UBT2 640 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 SARDHQ9UL12 918 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 TTC7AQ9ULT0 858 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 MMP17Q9ULZ9 603 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 SNX12Q9UMY4 172 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 PACSIN2Q9UNF0 486 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 HS3ST2Q9Y278 367 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 HEY1Q9Y5J3 304 aa3.08□□□□□ -1.92
VPS13B-209ENST00000521559 RANBP2P49792 3224 aaKnown RBP3.08□□□□□ -1.92
VPS13B-209ENST00000521559 EDDM13A0A1B0GTR0 161 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 A0A1W2PQF6 199 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 BCLAF3A2AJT9 711 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 WASH3PC4AMC7 463 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 F5H0A9 414 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 H7C0C1 242 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 APOC4-APOC2K7ER74 178 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 K7ERQ8 282 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 KIF2AO00139 706 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 MCF2LO15068 1137 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 XPNPEP2O43895 674 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 SYNCRIPO60506 623 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF821O75541 412 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF189O75820 626 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 APBB3O95704 486 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 POP4O95707 220 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 GSRP00390 522 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 APOC2P02655 101 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 FGGP02679 453 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 HLA-EP13747 358 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 CCNB1P14635 433 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 TCP1P17987 556 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 AGAP20933 346 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 HOXA6P31267 233 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 CPOXP36551 454 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 HSPA9P38646 679 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 GARSP41250 739 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 ATP5OP48047 213 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 CSNK1DP48730 415 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 STK19P49842 368 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 CCR3P51677 355 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 CLCNKAP51800 687 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 TERF1P54274 439 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 EIF3EP60228 445 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 RPS14P62263 151 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 SNRPD1P62314 119 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 IFI35P80217 286 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 OTUD4Q01804 1114 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 PPIDQ08752 370 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 SLC10A7Q0GE19 358 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 ELAVL3Q14576 367 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 RBBP5Q15291 538 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 SIX1Q15475 284 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 CCNG2Q16589 344 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 MYLK3Q32MK0 819 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 HNRNPA1L2Q32P51 320 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 SLC45A4Q5BKX6 768 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 C9orf64Q5T6V5 341 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 SEL1L2Q5TEA6 688 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 MARC1Q5VT66 337 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 ADAM5Q6NVV9 412 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 MZT2BQ6NZ67 158 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 METTL2BQ6P1Q9 378 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 INO80CQ6PI98 192 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 SYT10Q6XYQ8 523 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 B3GNT6Q6ZMB0 384 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 LEKR1Q6ZMV7 388 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 MEX3BQ6ZN04 569 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 TAOK1Q7L7X3 1001 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 SLC46A3Q7Z3Q1 461 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 CPLX4Q7Z7G2 160 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 DSG4Q86SJ6 1040 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 ZSCAN30Q86W11 494 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 CDKL3Q8IVW4 592 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 CCDC13Q8IYE1 715 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 STK40Q8N2I9 435 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 BBS5Q8N3I7 341 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 RASGEF1CQ8N431 466 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 ATPAF2Q8N5M1 289 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 TEX26Q8N6G2 289 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 PCDH20Q8N6Y1 951 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 TMEM105Q8N8V8 129 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 CCNYQ8ND76 341 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 OR2A12Q8NGT7 310 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 OR2T3Q8NH03 318 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 RPLP0P6Q8NHW5 317 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 ACTL9Q8TC94 416 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 ACTRT1Q8TDG2 376 aa3.07□□□□□ -1.92
VPS13B-209ENST00000521559 TFB1MQ8WVM0 346 aaKnown RBP3.07□□□□□ -1.92
VPS13B-209ENST00000521559 MAIP1Q8WWC4 291 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms