RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 MLNRO43193 412 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 TNFSF12O43508 249 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 SNX4O95219 450 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 TGDSO95455 350 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 RPLP0P05388 317 aaKnown RBP3.05□□□□□ -1.92
VPS13B-207ENST00000518569 ARF4P18085 180 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-207ENST00000518569 MAPK3P27361 379 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-207ENST00000518569 PKLRP30613 574 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 SRD5A2P31213 254 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 SLC1A3P43003 542 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 NDST2P52849 883 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 ASIC1P78348 528 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 AP1B1Q10567 949 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 MS4A18Q3C1V0 323 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 C2orf76Q3KRA6 126 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 FUT11Q495W5 492 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 LRRC37A5PQ49AS3 106 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 HSP90AA5PQ58FG0 334 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 FAM182AQ5T1J6 154 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 LRRC38Q5VT99 294 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 AGAP6Q5VW22 663 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 ALKBH5Q6P6C2 394 aaKnown RBP3.05□□□□□ -1.92
VPS13B-207ENST00000518569 PODNL1Q6PEZ8 512 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 CCBE1Q6UXH8 406 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-207ENST00000518569 Q6ZVQ6 151 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 PPP1R42Q7Z4L9 355 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 TMEM110Q86TL2 294 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 GTSCR1Q86UQ5 136 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 MYPOPQ86VE0 399 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-207ENST00000518569 PHC2Q8IXK0 858 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 KLHDC8AQ8IYD2 350 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 ZNF444Q8N0Y2 327 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-207ENST00000518569 AQP11Q8NBQ7 271 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 RNF149Q8NC42 400 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 KIAA0895Q8NCT3 520 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 OR9Q2Q8NGE9 314 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 SAP25Q8TEE9 199 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 ATP6V0A1Q93050 837 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 ATOH8Q96SQ7 321 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 CCDC94Q9BW85 323 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-207ENST00000518569 NT5C3AQ9H0P0 336 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 CLSTN2Q9H4D0 955 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 GPN1Q9HCN4 374 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-207ENST00000518569 FANCFQ9NPI8 374 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 ABCB8Q9NUT2 735 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 TMOD3Q9NYL9 352 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 PAK5Q9P286 719 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 ZNF608Q9ULD9 1512 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-207ENST00000518569 IGHV3-38A0A0C4DH36 116 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 A0A0U1RQK1 487 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 C13orf42A0A1B0GVH6 325 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 ZNF320A2RRD8 509 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 LMO7DNF2Z398 122 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 DDX39AO00148 427 aaKnown RBP3.04□□□□□ -1.92
VPS13B-207ENST00000518569 MCF2LO15068 1137 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 INPP4BO15327 924 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 TXNL1O43396 289 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 ZBTB14O43829 449 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 SNAP91O60641 907 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 ATP9AO75110 1047 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 LRCH4O75427 683 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 BBOX1O75936 387 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 GLCEO94923 617 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 GOSR1O95249 250 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 FGF19O95750 216 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 SLC4A1P02730 911 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 OPN1MWP04001 364 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 OPN1MW2P0DN77 364 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 OPN1MW3P0DN78 364 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 AOC1P19801 751 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 PAX7P23759 505 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 TMOD1P28289 359 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 ASMTP46597 345 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 POLR2FP61218 127 aaKnown RBP3.04□□□□□ -1.92
VPS13B-207ENST00000518569 STX1BP61266 288 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 SLC34A1Q06495 639 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 SLC3A1Q07837 685 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 CNTN1Q12860 1018 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 GPR50Q13585 617 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 RAPSNQ13702 412 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 CEACAM7Q14002 265 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 KIAA0141Q14154 515 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-207ENST00000518569 MAPK11Q15759 364 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 UPP1Q16831 310 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 SNAI3Q3KNW1 292 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 CCDC122Q5T0U0 273 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 ZNF776Q68DI1 518 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-207ENST00000518569 OLFM4Q6UX06 510 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 RFPL4BQ6ZWI9 263 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 PIWIL3Q7Z3Z3 882 aaKnown RBP3.04□□□□□ -1.92
VPS13B-207ENST00000518569 FAM131BQ86XD5 332 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 CCDC170Q8IYT3 715 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 ZNF619Q8N2I2 560 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 C10orf53Q8N6V4 93 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 ANKRD49Q8WVL7 239 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-207ENST00000518569 ZNF75CPQ92670 426 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-207ENST00000518569 TAF15Q92804 592 aaKnown RBP eCLIP3.04□□□□□ -1.92
VPS13B-207ENST00000518569 C11orf52Q96A22 123 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 WBP1Q96G27 269 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms