RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 C7orf57Q8NEG2 295 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 ABHD11Q8NFV4 315 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 OR14A16Q8NHC5 309 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 UTP15Q8TED0 518 aaKnown RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 FAM136AQ96C01 138 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 TIMP4Q99727 224 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 WDR83Q9BRX9 315 aaKnown RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 SLC6A15Q9H2J7 730 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 RHBGQ9H310 441 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 ACBD3Q9H3P7 528 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 PIGMQ9H3S5 423 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 GOLPH3Q9H4A6 298 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 CXorf56Q9H5V9 222 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 NHEJ1Q9H9Q4 299 aaPredicted RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 LIN28AQ9H9Z2 209 aaKnown RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 SEMA4BQ9NPR2 832 aaPredicted RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 CHRAC1Q9NRG0 131 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 PRTFDC1Q9NRG1 225 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 TREX1Q9NSU2 369 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 CNIH4Q9P003 139 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 ZFP69BQ9UJL9 534 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 GOLGA6L19H0YKK7 550 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 EIF3FO00303 357 aaPredicted RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 WIPF1O43516 503 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 TPM3P06753 285 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 FAM157CP0CG43 387 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 TMIGD3P0DMS9 266 aaPredicted RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 CDH1P12830 882 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 STIP1P31948 543 aaKnown RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 PIGAP37287 484 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 RWDD2BP57060 319 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 SLC13A2Q13183 592 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 ETFDHQ16134 617 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 WIPI1Q5MNZ9 446 aaPredicted RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 LCE2AQ5TA79 106 aaPredicted RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 LRRC8EQ6NSJ5 796 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 PLEKHM3Q6ZWE6 761 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 UBE2R2Q712K3 238 aaPredicted RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 CA13Q8N1Q1 262 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 RNF214Q8ND24 703 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 TRPV3Q8NET8 790 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 OR4K1Q8NGD4 311 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 PAQR8Q8TEZ7 354 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 TMEM171Q8WVE6 324 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 CALR3Q96L12 384 aaKnown RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 TRIB1Q96RU8 372 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 NPLQ9BXD5 320 aaPredicted RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 ETNK1Q9HBU6 452 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 ZNF701Q9NV72 531 aaPredicted RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 TRMT1Q9NXH9 659 aaKnown RBP9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 CRYL1Q9Y2S2 319 aa9.04□□□□□ -0.96
SH2D4A-202ENST00000518040 CD5LO43866 347 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 SOX30O94993 753 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 RFPL3SP0C7P2 107 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 OGNP20774 298 aaKnown RBP9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 RPL21P46778 160 aaKnown RBP9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 CLCN7P51798 805 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 GDF10P55107 478 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 WNT3P56703 355 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 RNF4P78317 190 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 TNK1Q13470 666 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 RCN2Q14257 317 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 IQCB1Q15051 598 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 NHSL2Q5HYW2 709 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 TBCELQ5QJ74 424 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 AGTRAPQ6RW13 159 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 LUZP1Q86V48 1076 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 CAND1Q86VP6 1230 aaKnown RBP9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 GAS2L3Q86XJ1 694 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 ZNF595Q8IYB9 648 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 SLC15A4Q8N697 577 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 ZNF441Q8N8Z8 693 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 TC2NQ8N9U0 490 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 GABPB2Q8TAK5 448 aaPredicted RBP9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 SLC22A8Q8TCC7 542 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 ZPLD1Q8TCW7 415 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 UCN3Q969E3 161 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 TM9SF2Q99805 663 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 SGPP1Q9BX95 441 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 IL22Q9GZX6 179 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 SH2D2AQ9NP31 389 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 C6orf203Q9P0P8 240 aaPredicted RBP9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 GALPQ9UBC7 116 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 CAMK2AQ9UQM7 478 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 ZNF148Q9UQR1 794 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 IKBKGQ9Y6K9 419 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 ANK2Q01484 3957 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 CUBNO60494 3623 aa9.03□□□□□ -0.96
SH2D4A-202ENST00000518040 EML6Q6ZMW3 1958 aa9.02□□□□□ -0.97
SH2D4A-202ENST00000518040 A0A088AWK7 358 aa9.02□□□□□ -0.97
SH2D4A-202ENST00000518040 DEFB108AA8MXU0 73 aa9.02□□□□□ -0.97
SH2D4A-202ENST00000518040 B3GALT4O96024 378 aa9.02□□□□□ -0.97
SH2D4A-202ENST00000518040 C1QAP02745 245 aa9.02□□□□□ -0.97
SH2D4A-202ENST00000518040 IFNA16P05015 189 aa9.02□□□□□ -0.97
SH2D4A-202ENST00000518040 TPM1P09493 284 aa9.02□□□□□ -0.97
SH2D4A-202ENST00000518040 SMIM10L1P0DMW3 83 aa9.02□□□□□ -0.97
SH2D4A-202ENST00000518040 NPPBP16860 134 aa9.02□□□□□ -0.97
SH2D4A-202ENST00000518040 ZNF10P21506 573 aaPredicted RBP9.02□□□□□ -0.97
SH2D4A-202ENST00000518040 CRYGSP22914 178 aa9.02□□□□□ -0.97
SH2D4A-202ENST00000518040 GDF1P27539 372 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms