RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 CYP4Z2PQ8N1L4 340 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 ARMC10Q8N2F6 343 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 GHDCQ8N2G8 530 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 MORN4Q8NDC4 146 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 MNS1Q8NEH6 495 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 OR7G3Q8NG95 312 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 OR14A16Q8NHC5 309 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 ASB15Q8WXK1 588 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 IFT81Q8WYA0 676 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 RGMAQ96B86 450 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 VPS11Q9H270 941 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 TIMMDC1Q9NPL8 285 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 ZDHHC18Q9NUE0 388 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 VTI1BQ9UEU0 232 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 PPIEQ9UNP9 301 aaKnown RBP12.74□□□□□ -0.37
TCOF1-215ENST00000515516 YARS2Q9Y2Z4 477 aaKnown RBP12.74□□□□□ -0.37
TCOF1-215ENST00000515516 ASB1Q9Y576 335 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 PCDHGA11Q9Y5H2 935 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 CNTRLQ7Z7A1 2325 aa12.74□□□□□ -0.37
TCOF1-215ENST00000515516 SCN3AQ9NY46 2000 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 A8MVJ9 347 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 SAP18O00422 153 aaKnown RBP12.73□□□□□ -0.37
TCOF1-215ENST00000515516 RTCAO00442 366 aaKnown RBP12.73□□□□□ -0.37
TCOF1-215ENST00000515516 TFECO14948 347 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-215ENST00000515516 HNRNPRO43390 633 aaKnown RBP12.73□□□□□ -0.37
TCOF1-215ENST00000515516 PEX1O43933 1283 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 COX7A2P14406 83 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 TLX1P31314 330 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-215ENST00000515516 ARL1P40616 181 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-215ENST00000515516 PIK3CBP42338 1070 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 MEOX1P50221 254 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 SMSP52788 366 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 ALDH18A1P54886 795 aaKnown RBP12.73□□□□□ -0.37
TCOF1-215ENST00000515516 PCDH1Q08174 1060 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 SLAMF1Q13291 335 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 ART3Q13508 389 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 E2F2Q14209 437 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 NAA30Q147X3 362 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-215ENST00000515516 SETDB1Q15047 1291 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 C3AR1Q16581 482 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 DEPDC1Q5TB30 811 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 OR4C11Q6IEV9 310 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 UBE3DQ7Z6J8 389 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 MRGPRGQ86SM5 289 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 CENPLQ8N0S6 344 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-215ENST00000515516 EID3Q8N140 333 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 ZNF808Q8N4W9 903 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-215ENST00000515516 CPSF7Q8N684 471 aaKnown RBP12.73□□□□□ -0.37
TCOF1-215ENST00000515516 OR5L2Q8NGL0 311 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 ATP6V1E2Q96A05 226 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 CCDC120Q96HB5 630 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 MAPKAP1Q9BPZ7 522 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 OR8D2Q9GZM6 311 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 OR51B5Q9H339 312 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 HPF1Q9NWY4 346 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 MS4A12Q9NXJ0 267 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 NINJ2Q9NZG7 142 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 KCMF1Q9P0J7 381 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 CPSF2Q9P2I0 782 aaKnown RBP12.73□□□□□ -0.37
TCOF1-215ENST00000515516 COPS7AQ9UBW8 275 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 ENTPD4Q9Y227 616 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 NAV2Q8IVL1 2488 aa12.73□□□□□ -0.37
TCOF1-215ENST00000515516 SPTBN1Q01082 2364 aaKnown RBP12.73□□□□□ -0.37
TCOF1-215ENST00000515516 ICE1Q9Y2F5 2266 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 MYOCOSA0A1B0GUC4 107 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 ARHGAP10A1A4S6 786 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 C17orf105B2RV13 164 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 TGFBR3LH3BV60 316 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 UGDHO60701 494 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 LDB3O75112 727 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 MTHFD2P13995 350 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 PTX3P26022 381 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-215ENST00000515516 SERPINB9P50453 376 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 BIKQ13323 160 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 GTF2H2Q13888 395 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 GTF2H2CQ6P1K8 395 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 ZNF793Q6ZN11 406 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 SIAH3Q8IW03 269 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 SULF2Q8IWU5 870 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 MMGT1Q8N4V1 131 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 HUS1BQ8NHY5 278 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 ITLN2Q8WWU7 325 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-215ENST00000515516 RBM18Q96H35 190 aaKnown RBP12.72□□□□□ -0.37
TCOF1-215ENST00000515516 DGAT2Q96PD7 388 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 MTERF1Q99551 399 aaKnown RBP12.72□□□□□ -0.37
TCOF1-215ENST00000515516 ACSS3Q9H6R3 686 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 MYOTQ9UBF9 498 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 PHF11Q9UIL8 331 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 TINAGQ9UJW2 476 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 KLF2Q9Y5W3 355 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-215ENST00000515516 POLEQ07864 2286 aa12.72□□□□□ -0.37
TCOF1-215ENST00000515516 DOPEY1Q5JWR5 2465 aa12.71□□□□□ -0.37
TCOF1-215ENST00000515516 PRRG2O14669 202 aa12.71□□□□□ -0.37
TCOF1-215ENST00000515516 OR2J2O76002 312 aa12.71□□□□□ -0.37
TCOF1-215ENST00000515516 KRT38O76015 456 aa12.71□□□□□ -0.37
TCOF1-215ENST00000515516 WISP2O76076 250 aa12.71□□□□□ -0.37
TCOF1-215ENST00000515516 SCELO95171 688 aa12.71□□□□□ -0.37
TCOF1-215ENST00000515516 ACSL3O95573 720 aa12.71□□□□□ -0.37
TCOF1-215ENST00000515516 TUBB4AP04350 444 aa12.71□□□□□ -0.37
TCOF1-215ENST00000515516 RBP1P09455 135 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms