RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 PDGFRAP16234 1089 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 PBLDP30039 288 aaPredicted RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 HSPA4P34932 840 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 CTNNA1P35221 906 aaKnown RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 IL15P40933 162 aaPredicted RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 CASP9P55211 416 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 TMPRSS3P57727 454 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 SLC26A5P58743 744 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 GABPAQ06546 454 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 C17orf67Q0P5P2 114 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 TAB1Q15750 504 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 ODF4Q2M2E3 257 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 MCMDC2Q4G0Z9 681 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 SPATA46Q5T0L3 261 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 CNSTQ6PJW8 725 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 BTNL8Q6UX41 500 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 TMEM182Q6ZP80 229 aaPredicted RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 COX8CQ7Z4L0 72 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 NLRP14Q86W24 1093 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 OR5M8Q8NGP6 311 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 OR1L3Q8NH93 324 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 C8orf46Q8TAG6 207 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 LRRC45Q96CN5 670 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 OTUB1Q96FW1 271 aaPredicted RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 COG3Q96JB2 828 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 HSD3B7Q9H2F3 369 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 SNX25Q9H3E2 840 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 EHD1Q9H4M9 534 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 MTHFD2LQ9H903 347 aaPredicted RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 LIN28AQ9H9Z2 209 aaKnown RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 MRGBPQ9NV56 204 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 DDX43Q9NXZ2 648 aaKnown RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 AATFQ9NY61 560 aaKnown RBP eCLIP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 C6orf203Q9P0P8 240 aaPredicted RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 TEKT2Q9UIF3 430 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 TRIP12Q14669 1992 aaPredicted RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 C15orf61A6NNL5 157 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 MPTX1A8MV57 137 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 A8MV72 311 aaPredicted RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 PRR23D1E9PI22 279 aaPredicted RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 C16orf97H3BN30 126 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 BLOC1S5-TXNDC5H3BN57 136 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 ARPC2O15144 300 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 NMT2O60551 498 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 ZBTB11O95625 1053 aaPredicted RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 BAG3O95817 575 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 RAF1P04049 648 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 PROS1P07225 676 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 PRR23D2P0DMB1 279 aaPredicted RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 HSPA5P11021 654 aaKnown RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 MARK3P27448 753 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 WNT5AP41221 380 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 PTENP60484 403 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 TAF13Q15543 124 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 ALS2CLQ60I27 953 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 OR4A47Q6IF82 309 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 IYDQ6PHW0 289 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 NRARPQ7Z6K4 114 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 TRIM7Q9C029 511 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 WWTR1Q9GZV5 400 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 DNAJB9Q9UBS3 223 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 FAM153AQ9UHL3 310 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 CFAP45Q9UL16 551 aa1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 SPIN1Q9Y657 262 aaPredicted RBP1.48□□□□□ -2.17
AC025539.1-201ENST00000515343 LINC00854A0A1B0GVQ3 168 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 LRRD1A4D1F6 860 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 A4D1N5 150 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 TRIM64A6NGJ6 449 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 TRIM64BA6NI03 449 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 OR5K4A6NMS3 321 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 K7EPI3 171 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 L7N2F9 121 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 CACNB4O00305 520 aaPredicted RBP1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 NR5A2O00482 541 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 MPHOSPH10O00566 681 aaKnown RBP1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 NDC80O14777 642 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 FGF19O95750 216 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 SLC12A3P55017 1021 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 GNB1P62873 340 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 HTD2P86397 168 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 ITGA9Q13797 1035 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 LASP1Q14847 261 aaKnown RBP1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 ANKDD1AQ495B1 522 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 HERC4Q5GLZ8 1057 aaPredicted RBP1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 SIRPB2Q5JXA9 342 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 KRTAP5-4Q6L8H1 288 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 FAM53AQ6NSI3 398 aaPredicted RBP1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 KIAA1161Q6NSJ0 714 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 ALKBH5Q6P6C2 394 aaKnown RBP1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 OLFM4Q6UX06 510 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 ZYG11AQ6WRX3 759 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 BNIPLQ7Z465 357 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 CUZD1Q86UP6 607 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 ANKRD46Q86W74 232 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 MEX3DQ86XN8 651 aaKnown RBP1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 KIRREL3Q8IZU9 778 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 ARL14Q8N4G2 192 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 DCLK2Q8N568 766 aa1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 RTL3Q8N8U3 475 aaKnown RBP1.47□□□□□ -2.17
AC025539.1-201ENST00000515343 WDSUB1Q8N9V3 476 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms