RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 PRPS2P11908 318 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 XPAP23025 273 aaPredicted RBP9.23□□□□□ -0.93
VCAN-210ENST00000513960 CHIT1Q13231 466 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 ARHGEF6Q15052 776 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 PTGES3Q15185 160 aaKnown RBP9.23□□□□□ -0.93
VCAN-210ENST00000513960 TOR2AQ5JU69 321 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 CPTPQ5TA50 214 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 CHMP1BQ7LBR1 199 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 METTL3Q86U44 580 aaKnown RBP9.23□□□□□ -0.93
VCAN-210ENST00000513960 CELF5Q8N6W0 485 aaKnown RBP9.23□□□□□ -0.93
VCAN-210ENST00000513960 TCEANCQ8N8B7 351 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 NFKBIDQ8NI38 313 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 SETD6Q8TBK2 473 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 ART5Q96L15 291 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 DUSP26Q9BV47 211 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 DPCDQ9BVM2 203 aaPredicted RBP9.23□□□□□ -0.93
VCAN-210ENST00000513960 TMEM184CQ9NVA4 438 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 KCNN3Q9UGI6 736 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 ING4Q9UNL4 249 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 POLHQ9Y253 713 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 SLC22A14Q9Y267 594 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 INSL5Q9Y5Q6 135 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 A0A0G2JMP0 313 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 FADS2P1A8MWK0 482 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 INMT-MINDY4F8WBC2 141 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 TLR4O00206 839 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 ORC5O43913 435 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 TOXO94900 526 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 KCNK5O95279 499 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 ETFAP13804 333 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 MYL12AP19105 171 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 GABRR2P28476 465 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 SSTR2P30874 369 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 KIR2DL3P43628 341 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 RPA4Q13156 261 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 FGFBP1Q14512 234 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 FXNQ16595 210 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 FAM205BPQ63HN1 556 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 ANKRD54Q6NXT1 300 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 UBE2R2Q712K3 238 aaPredicted RBP9.23□□□□□ -0.93
VCAN-210ENST00000513960 CRIPAKQ8N1N5 446 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 NXPE1Q8N323 547 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 C9orf43Q8TAL5 461 aaPredicted RBP9.23□□□□□ -0.93
VCAN-210ENST00000513960 AUTS2Q8WXX7 1259 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 KCTD5Q9NXV2 234 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 NKIRAS2Q9NYR9 191 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 ZNF226Q9NYT6 803 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 YARS2Q9Y2Z4 477 aaKnown RBP9.23□□□□□ -0.93
VCAN-210ENST00000513960 POLR1CO15160 346 aaPredicted RBP9.23□□□□□ -0.93
VCAN-210ENST00000513960 LRRTM2O43300 516 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 GSTM1P09488 218 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 EBLN1P0CF75 366 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 SDC2P34741 201 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 NSG1P42857 185 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 RAB8AP61006 207 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 SNRPD1P62314 119 aaKnown RBP9.23□□□□□ -0.93
VCAN-210ENST00000513960 RPL6Q02878 288 aaKnown RBP9.23□□□□□ -0.93
VCAN-210ENST00000513960 CSTF1Q05048 431 aaKnown RBP9.23□□□□□ -0.93
VCAN-210ENST00000513960 RAB33AQ14088 237 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 XKR6Q5GH73 641 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 TMIGD1Q6UXZ0 262 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 SHFQ7M4L6 423 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 GRAMD2AQ8IUY3 354 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 NAGSQ8N159 534 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 ALG14Q96F25 216 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 MCCC1Q96RQ3 725 aaPredicted RBP9.23□□□□□ -0.93
VCAN-210ENST00000513960 ATP13A2Q9NQ11 1180 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 ACOXLQ9NUZ1 547 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 CFAP97Q9P2B7 532 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 BRCA2P51587 3418 aa9.23□□□□□ -0.93
VCAN-210ENST00000513960 LOC105371267A0A1B0GV96 52 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 CIB4A0PJX0 185 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 SAP18O00422 153 aaKnown RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 IGFBP1P08833 259 aaPredicted RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 UBL4AP11441 157 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 COX10Q12887 443 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 KIAA0040Q15053 153 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 MPPE1Q53F39 396 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 ATAT1Q5SQI0 421 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 GPRC6AQ5T6X5 926 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 NOXRED1Q6NXP6 359 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 MACC1Q6ZN28 852 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 CBLL1Q75N03 491 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 ZNF551Q7Z340 670 aaPredicted RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 RNF130Q86XS8 419 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 FAM9CQ8IZT9 166 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 IQCF1Q8N6M8 205 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 SYT14Q8NB59 555 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 OR2AP1Q8NGE2 309 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 A3GALT2U3KPV4 340 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 WASHC1A8K0Z3 465 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 CSF3P09919 207 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 LRRC32Q14392 662 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 LARS2Q15031 903 aaKnown RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 ATP13A5Q4VNC0 1218 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 KLHL12Q53G59 568 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 B3GLCTQ6Y288 498 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 USP45Q70EL2 814 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 TSPAN33Q86UF1 283 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 LAPTM4BQ86VI4 370 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms