RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 CCDC77Q9BR77 488 aa6.09□□□□□ -1.43
KDM3B-208ENST00000512928 TBCDQ9BTW9 1192 aa6.09□□□□□ -1.43
KDM3B-208ENST00000512928 NPLQ9BXD5 320 aaPredicted RBP6.09□□□□□ -1.43
KDM3B-208ENST00000512928 MS4A8Q9BY19 250 aa6.09□□□□□ -1.43
KDM3B-208ENST00000512928 NOL11Q9H8H0 719 aaKnown RBP6.09□□□□□ -1.43
KDM3B-208ENST00000512928 CLK4Q9HAZ1 481 aaKnown RBP6.09□□□□□ -1.43
KDM3B-208ENST00000512928 SEMA4BQ9NPR2 832 aaPredicted RBP6.09□□□□□ -1.43
KDM3B-208ENST00000512928 COPG2Q9UBF2 871 aa6.09□□□□□ -1.43
KDM3B-208ENST00000512928 TBK1Q9UHD2 729 aa6.09□□□□□ -1.43
KDM3B-208ENST00000512928 DAPP1Q9UN19 280 aa6.09□□□□□ -1.43
KDM3B-208ENST00000512928 OSGIN2Q9Y236 505 aa6.09□□□□□ -1.43
KDM3B-208ENST00000512928 RNF11Q9Y3C5 154 aa6.09□□□□□ -1.43
KDM3B-208ENST00000512928 MMACHCQ9Y4U1 282 aa6.09□□□□□ -1.43
KDM3B-208ENST00000512928 CLCA3PQ9Y6N3 262 aa6.09□□□□□ -1.43
KDM3B-208ENST00000512928 IGKV3D-11A0A0A0MRZ8 115 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 IQANK1A0A1B0GTG1 560 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 CLEC18AA5D8T8 446 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 SMIM23A6NLE4 172 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 GOLGA8RI6L899 631 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 E2F3O00716 465 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 FCHO1O14526 889 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 LRRTM2O43300 516 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 LDB3O75112 727 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 UNC5CO95185 931 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 CLDN9O95484 217 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 TBX6O95947 436 aaPredicted RBP6.08□□□□□ -1.44
KDM3B-208ENST00000512928 CRYABP02511 175 aaKnown RBP6.08□□□□□ -1.44
KDM3B-208ENST00000512928 SHBGP04278 402 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 EDN3P14138 238 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 TSPAN8P19075 237 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 HIST1H1TP22492 207 aaPredicted RBP6.08□□□□□ -1.44
KDM3B-208ENST00000512928 ATP5A1P25705 553 aaKnown RBP6.08□□□□□ -1.44
KDM3B-208ENST00000512928 TPP2P29144 1249 aaPredicted RBP6.08□□□□□ -1.44
KDM3B-208ENST00000512928 CD96P40200 585 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 CASP2P42575 452 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 CLCN2P51788 898 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 NEK2P51955 445 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 HSD17B7P56937 341 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 KCNK10P57789 538 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 RPS13P62277 151 aaKnown RBP6.08□□□□□ -1.44
KDM3B-208ENST00000512928 SLAMF1Q13291 335 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 PCBP2Q15366 365 aaKnown RBP eCLIP6.08□□□□□ -1.44
KDM3B-208ENST00000512928 ZRSR2Q15696 482 aaKnown RBP6.08□□□□□ -1.44
KDM3B-208ENST00000512928 INAQ16352 499 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 ADPRMQ3LIE5 342 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 LIPJQ5W064 366 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 OR4C11Q6IEV9 310 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 CYP20A1Q6UW02 462 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 CLEC18BQ6UXF7 455 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 GFRALQ6UXV0 394 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 ZNF793Q6ZN11 406 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 OR4N5Q8IXE1 308 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 TMEM151AQ8N4L1 468 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 HORMAD2Q8N7B1 307 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 TMEM178AQ8NBL3 297 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 CLEC18CQ8NCF0 446 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 ST6GALNAC3Q8NDV1 305 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 B3GNT7Q8NFL0 401 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 OR52B6Q8NGF0 335 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 ELP5Q8TE02 316 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 ZNF473Q8WTR7 871 aaKnown RBP6.08□□□□□ -1.44
KDM3B-208ENST00000512928 UBLCP1Q8WVY7 318 aaPredicted RBP6.08□□□□□ -1.44
KDM3B-208ENST00000512928 NCLNQ969V3 563 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 TMEM125Q96AQ2 219 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 RGMAQ96B86 450 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 SIGLEC12Q96PQ1 595 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 TAAR6Q96RI8 345 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 MAPKAP1Q9BPZ7 522 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 MRPL57Q9BQC6 102 aaKnown RBP6.08□□□□□ -1.44
KDM3B-208ENST00000512928 HES7Q9BYE0 225 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 ALOXE3Q9BYJ1 711 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 OR8D2Q9GZM6 311 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 RNF32Q9H0A6 362 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 TSPAN10Q9H1Z9 355 aaPredicted RBP6.08□□□□□ -1.44
KDM3B-208ENST00000512928 MRPL46Q9H2W6 279 aaKnown RBP6.08□□□□□ -1.44
KDM3B-208ENST00000512928 ELOVL6Q9H5J4 265 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 LYRM4Q9HD34 91 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 ADAP2Q9NPF8 381 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 DMRT3Q9NQL9 472 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 PRDM7Q9NQW5 492 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 MKS1Q9NXB0 559 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 LRFN1Q9P244 771 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 SEC14L3Q9UDX4 400 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 ADGRE2Q9UHX3 823 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 SH3BGRL2Q9UJC5 107 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 TMCO1Q9UM00 188 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 ERVK-11Q9UQG0 969 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 SLC5A6Q9Y289 635 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 PCDHGA11Q9Y5H2 935 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 SHANK1Q9Y566 2161 aa6.08□□□□□ -1.44
KDM3B-208ENST00000512928 TRGV8A0A0C4DH27 118 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 ARHGAP10A1A4S6 786 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 GLOD5A6NK44 160 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 C17orf105B2RV13 164 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 TGFBR3LH3BV60 316 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 CYR61O00622 381 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 PLPP1O14494 284 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 OR7A17O14581 309 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 DYRK3O43781 588 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 KLK8O60259 260 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms