RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 REEP5Q00765 189 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 PRDX1Q06830 199 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 CUL3Q13618 768 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 IL11RAQ14626 422 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 RFTN2Q52LD8 501 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 SPIN4Q56A73 249 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 CACHD1Q5VU97 1274 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 PRMT9Q6P2P2 845 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 IYDQ6PHW0 289 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 C17orf64Q86WR6 236 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 PPP1R3BQ86XI6 285 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 ZNF295-AS1Q8N0V1 137 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 KRT78Q8N1N4 520 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 LINC01555Q8NAE3 123 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 PCYOX1LQ8NBM8 494 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 TTLQ8NG68 377 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 PROKR1Q8TCW9 393 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 SLC22A18Q96BI1 424 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 TESCQ96BS2 214 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 ZNF764Q96H86 408 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 HOPXQ9BPY8 73 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 GPR87Q9BY21 358 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 MRPL1Q9BYD6 325 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 TRIM8Q9BZR9 551 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 OSGEPL1Q9H4B0 414 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 SLC40A1Q9NP59 571 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 VPS29Q9UBQ0 182 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 TBC1D29Q9UFV1 150 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 RUVBL1Q9Y265 456 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 FARSAQ9Y285 508 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 PTGDR2Q9Y5Y4 395 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 MN1Q10571 1320 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 C15orf38-AP3S2A0A0A6YYH1 394 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 PDZK1P1A8MUH7 402 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 ANKRD65E5RJM6 399 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 KIF1CO43896 1103 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 ANKRD34CP0C6C1 535 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 FGF5P12034 268 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 AMD1P17707 334 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 RPL10P27635 214 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 HTR1EP28566 365 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 ARL1P40616 181 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 CCR8P51685 355 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 MTTPP55157 894 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 CLDN8P56748 225 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 UBE2IP63279 158 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 ART3Q13508 389 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 RPS6KA2Q15349 733 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 IMPG1Q17R60 797 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 TRMT5Q32P41 509 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 AGKQ53H12 422 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 CRB2Q5IJ48 1285 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 PWWP2BQ6NUJ5 590 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 CYB5D1Q6P9G0 228 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 CYP20A1Q6UW02 462 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 CAMKMTQ7Z624 323 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 NET1Q7Z628 596 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 ARPINQ7Z6K5 226 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 DSELQ8IZU8 1212 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 KIF2BQ8N4N8 673 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 LMNTD1Q8N9Z9 388 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 FAM13CQ8NE31 585 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 OR52E1Q8NGJ3 308 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 OR2A1Q8NGT9 310 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 CHTF18Q8WVB6 975 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 MCUR1Q96AQ8 359 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 SH3KBP1Q96B97 665 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 CXorf40BQ96DE9 158 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 PPP1R36Q96LQ0 422 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 SERPINI1Q99574 410 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 NRTNQ99748 197 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 AIF1LQ9BQI0 150 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 GPATCH1Q9BRR8 931 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 AGPAT4Q9NRZ5 378 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 TMEM184CQ9NVA4 438 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 SCHIP1Q9P0W5 487 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 ABCD2Q9UBJ2 740 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 ICKQ9UPZ9 632 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 GMEB1Q9Y692 573 aa9.93□□□□□ -0.82
PDLIM5-217ENST00000512274 NF1P21359 2839 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 MYO7BQ6PIF6 2116 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 A0A088AWK7 358 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 LOC100653049A0A140TA62 436 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 A0A1B0GUH1 482 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 KRT87PA6NCN2 255 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 FBP2O00757 339 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 FFAR3O14843 346 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 GPR42O15529 346 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 KRT34O76011 436 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 C9P02748 559 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 IL6P05231 212 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 BCKDHAP12694 445 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 DRD2P14416 443 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 PRPS1L1P21108 318 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 AHRP35869 848 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 PGM1P36871 562 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 SLC19A1P41440 591 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 TSFMP43897 325 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 ASMTP46597 345 aa9.92□□□□□ -0.82
PDLIM5-217ENST00000512274 EPHA4P54764 986 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms