RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 AHRP35869 848 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 NPY2RP49146 381 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 HK2P52789 917 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 KLF1Q13351 362 aaPredicted RBP10.65□□□□□ -0.7
RNF4-216ENST00000511859 NAE1Q13564 534 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 NSUN5P2Q63ZY6 315 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 AGTRAPQ6RW13 159 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 SCUBE1Q8IWY4 988 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 CA13Q8N1Q1 262 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 DAZLQ92904 295 aaKnown RBP10.65□□□□□ -0.7
RNF4-216ENST00000511859 KIAA1191Q96A73 305 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 PERPQ96FX8 193 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 SLC30A3Q99726 388 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 CCL19Q99731 98 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 KIFC1Q9BW19 673 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 SGPP1Q9BX95 441 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 ZFP64Q9NPA5 681 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 RAB6BQ9NRW1 208 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 BFARQ9NZS9 450 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 NDRG3Q9UGV2 375 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 BOKQ9UMX3 212 aaPredicted RBP10.65□□□□□ -0.7
RNF4-216ENST00000511859 DHRS7Q9Y394 339 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 CLCA3PQ9Y6N3 262 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 CD8B2A6NJW9 211 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 EEF1E1-BLOC1S5C9J1V9 151 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 GOLGA8KD6RF30 607 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 GOLGA8TH3BQL2 631 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 EIF3FO00303 357 aaPredicted RBP10.65□□□□□ -0.71
RNF4-216ENST00000511859 EEF1E1O43324 174 aaKnown RBP10.65□□□□□ -0.71
RNF4-216ENST00000511859 RFPL3SP0C7P2 107 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 SESN2P58004 480 aaPredicted RBP10.65□□□□□ -0.71
RNF4-216ENST00000511859 RAB8AP61006 207 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 RNF4P78317 190 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 CRADDP78560 199 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 CUL1Q13616 776 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 ELAVL1Q15717 326 aaKnown RBP10.65□□□□□ -0.71
RNF4-216ENST00000511859 ACKR1Q16570 336 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 HEPHL1Q6MZM0 1159 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 SYT10Q6XYQ8 523 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 LRRC25Q8N386 305 aaPredicted RBP10.65□□□□□ -0.71
RNF4-216ENST00000511859 RASGEF1CQ8N431 466 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 MORN4Q8NDC4 146 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 TRPV3Q8NET8 790 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 ALKBH8Q96BT7 664 aaKnown RBP10.65□□□□□ -0.71
RNF4-216ENST00000511859 NTNG2Q96CW9 530 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 MFSD3Q96ES6 412 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 TIMP4Q99727 224 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 GSX2Q9BZM3 304 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 ZNF703Q9H7S9 590 aaPredicted RBP10.65□□□□□ -0.71
RNF4-216ENST00000511859 CALHM2Q9HA72 323 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 PRTFDC1Q9NRG1 225 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 INTS10Q9NVR2 710 aaKnown RBP10.65□□□□□ -0.71
RNF4-216ENST00000511859 ZNF148Q9UQR1 794 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 JRKLQ9Y4A0 524 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 CLDN16Q9Y5I7 305 aa10.65□□□□□ -0.71
RNF4-216ENST00000511859 MED12LQ86YW9 2145 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.64□□□□□ -0.712e-7■■■■■ 29.5
RNF4-216ENST00000511859 C15orf38-AP3S2A0A0A6YYH1 394 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 ERN1O75460 977 aaKnown RBP10.64□□□□□ -0.71
RNF4-216ENST00000511859 IFNB1P01574 187 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 PIGAP37287 484 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 SCTRP47872 440 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 AGFG1P52594 562 aaKnown RBP10.64□□□□□ -0.71
RNF4-216ENST00000511859 WNT3P56703 355 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 SLC13A2Q13183 592 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 DUSP8Q13202 625 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 MPEG1Q2M385 716 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 SEL1L2Q5TEA6 688 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 LRRC8EQ6NSJ5 796 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 CENPUQ71F23 418 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 CILP2Q8IUL8 1156 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 ZNF595Q8IYB9 648 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 GIMAP7Q8NHV1 300 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 KCNJ9Q92806 393 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 SNF8Q96H20 258 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 RBM24Q9BX46 236 aaKnown RBP10.64□□□□□ -0.71
RNF4-216ENST00000511859 NPLQ9BXD5 320 aaPredicted RBP10.64□□□□□ -0.71
RNF4-216ENST00000511859 PRDM14Q9GZV8 571 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 CCDC68Q9H2F9 335 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 SLC6A15Q9H2J7 730 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 PARVBQ9HBI1 364 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 RYDENQ9NUL5 291 aaKnown RBP10.64□□□□□ -0.71
RNF4-216ENST00000511859 MRPS33Q9Y291 106 aaKnown RBP10.64□□□□□ -0.71
RNF4-216ENST00000511859 NPFFR2Q9Y5X5 522 aa10.64□□□□□ -0.71
RNF4-216ENST00000511859 TCRBV7S2A1N4TA0A589 114 aa10.63□□□□□ -0.71
RNF4-216ENST00000511859 MBD3L3A6NE82 208 aaPredicted RBP10.63□□□□□ -0.71
RNF4-216ENST00000511859 KDM4EB2RXH2 506 aaPredicted RBP10.63□□□□□ -0.71
RNF4-216ENST00000511859 ZNF354AO60765 605 aaPredicted RBP10.63□□□□□ -0.71
RNF4-216ENST00000511859 IFNA16P05015 189 aa10.63□□□□□ -0.71
RNF4-216ENST00000511859 C8GP07360 202 aa10.63□□□□□ -0.71
RNF4-216ENST00000511859 SERPINA6P08185 405 aa10.63□□□□□ -0.71
RNF4-216ENST00000511859 PPP2R1BP30154 601 aa10.63□□□□□ -0.71
RNF4-216ENST00000511859 HNF4AP41235 474 aa10.63□□□□□ -0.71
RNF4-216ENST00000511859 KCNJ2P63252 427 aa10.63□□□□□ -0.71
RNF4-216ENST00000511859 CRYZQ08257 329 aaKnown RBP10.63□□□□□ -0.71
RNF4-216ENST00000511859 CSHL1Q14406 222 aa10.63□□□□□ -0.71
RNF4-216ENST00000511859 PIGGQ5H8A4 983 aa10.63□□□□□ -0.71
RNF4-216ENST00000511859 C20orf204Q6ZNR8 217 aa10.63□□□□□ -0.71
RNF4-216ENST00000511859 SYDE1Q6ZW31 735 aaPredicted RBP10.63□□□□□ -0.71
RNF4-216ENST00000511859 PALM2Q8IXS6 379 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms