RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ANKMY2Q8IV38 441 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 RNF175Q8N4F7 328 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 OR2L5Q8NG80 312 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 ZNF721Q8TF20 911 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 ANKRD9Q96BM1 317 aaPredicted RBP12.37□□□□□ -0.43
DDX41-210ENST00000509576 F2RL3Q96RI0 385 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 SMC6Q96SB8 1091 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 MAPKAP1Q9BPZ7 522 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 NPLQ9BXD5 320 aaPredicted RBP12.37□□□□□ -0.43
DDX41-210ENST00000509576 CXXC4Q9H2H0 198 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 CAB39LQ9H9S4 337 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 KCNJ16Q9NPI9 418 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 TIMMDC1Q9NPL8 285 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 HPF1Q9NWY4 346 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 VTI1BQ9UEU0 232 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 CORO1CQ9ULV4 474 aaPredicted RBP12.37□□□□□ -0.43
DDX41-210ENST00000509576 KCNE2Q9Y6J6 123 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 NCF1BA6NI72 391 aaPredicted RBP12.36□□□□□ -0.43
DDX41-210ENST00000509576 LRRC3CA6NJW4 275 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 NCF1CA8MVU1 366 aaPredicted RBP12.36□□□□□ -0.43
DDX41-210ENST00000509576 CLEC3AO75596 197 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 C1QAP02745 245 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 NCF1P14598 390 aaPredicted RBP12.36□□□□□ -0.43
DDX41-210ENST00000509576 ACVR2AP27037 513 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 PIGAP37287 484 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 WNT3P56703 355 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 SKP1P63208 163 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 RNF4P78317 190 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 PPP1R7Q15435 360 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 TGFBIQ15582 683 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 OR4D1Q15615 310 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 ZNF585AQ6P3V2 769 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 POMZP3Q6PJE2 187 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 TMEM200AQ86VY9 491 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 ZNF595Q8IYB9 648 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 RELL2Q8NC24 303 aaPredicted RBP12.36□□□□□ -0.43
DDX41-210ENST00000509576 NAXEQ8NCW5 288 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 OR5M3Q8NGP4 307 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 SLC2A12Q8TD20 617 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 ASB15Q8WXK1 588 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 CCT6BQ92526 530 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 SORBS1Q9BX66 1292 aaKnown RBP12.36□□□□□ -0.43
DDX41-210ENST00000509576 TRIM54Q9BYV2 358 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 NT5DC2Q9H857 520 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 PPANQ9NQ55 473 aaKnown RBP12.36□□□□□ -0.43
DDX41-210ENST00000509576 MOCS1Q9NZB8 636 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 KCNN3Q9UGI6 736 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 ASIC3Q9UHC3 531 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 ERVK-11Q9UQG0 969 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 ATG4BQ9Y4P1 393 aa12.36□□□□□ -0.43
DDX41-210ENST00000509576 MED12LQ86YW9 2145 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 FAM221AA4D161 298 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 URADA6NGE7 173 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 WASHC1A8K0Z3 465 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 CXorf49A8MYA2 514 aaPredicted RBP12.35□□□□□ -0.43
DDX41-210ENST00000509576 CLDN4O14493 209 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 B3GALT2O43825 422 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 CTNSO60931 367 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 SH3BGRLO75368 114 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 PRKRAO75569 313 aaKnown RBP12.35□□□□□ -0.43
DDX41-210ENST00000509576 CTAG2O75638 210 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 IGKV3-11P04433 115 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 STXBP1P61764 594 aaKnown RBP12.35□□□□□ -0.43
DDX41-210ENST00000509576 PLGLB1Q02325 96 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 DOC2AQ14183 400 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 FRG1Q14331 258 aaKnown RBP12.35□□□□□ -0.43
DDX41-210ENST00000509576 HYAL4Q2M3T9 481 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 OR4N5Q8IXE1 308 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 C9orf40Q8IXQ3 194 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 TBC1D19Q8N5T2 526 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 ARMC2Q8NEN0 867 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 ANKRD7Q92527 254 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 WDR34Q96EX3 536 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 EGFL8Q99944 293 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 ZNF559Q9BR84 538 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 ALOXE3Q9BYJ1 711 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 OR8D2Q9GZM6 311 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 REXO4Q9GZR2 422 aaKnown RBP12.35□□□□□ -0.43
DDX41-210ENST00000509576 GSX1Q9H4S2 264 aaPredicted RBP12.35□□□□□ -0.43
DDX41-210ENST00000509576 DLL4Q9NR61 685 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 CCM2LQ9NUG4 571 aaPredicted RBP12.35□□□□□ -0.43
DDX41-210ENST00000509576 SNX12Q9UMY4 172 aa12.35□□□□□ -0.43
DDX41-210ENST00000509576 MTO1Q9Y2Z2 717 aaKnown RBP12.35□□□□□ -0.43
DDX41-210ENST00000509576 ATP6AP2A0A1C7CYW4 349 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 A0A1W2PS29 197 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 AQP7O14520 342 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 PHGDHO43175 533 aaKnown RBP12.34□□□□□ -0.43
DDX41-210ENST00000509576 FGF17O60258 216 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 ATP6AP2O75787 350 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 LRATO95237 230 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 CLPSP04118 112 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 CD1EP15812 388 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 GNAZP19086 355 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 CNR1P21554 472 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 GGT5P36269 586 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 HSPA7P48741 367 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 MTTPP55157 894 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 IGLV3-21P80748 117 aaPredicted RBP12.34□□□□□ -0.43
DDX41-210ENST00000509576 BMPR2Q13873 1038 aa12.34□□□□□ -0.43
DDX41-210ENST00000509576 E2F2Q14209 437 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms