RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 A0A1W2PQC6 194 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ERVV-2B6SEH9 535 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 PRSS44E7EML9 344 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 MID1O15344 667 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 NKX2-8O15522 239 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 OGG1O15527 345 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 SPP1P10451 314 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 NR2F6P10588 404 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ADH5P11766 374 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ZNF7P17097 686 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 FDXRP22570 491 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 MARCKSP29966 332 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 PBX2P40425 430 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ALDH3B2P48448 385 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ERFP50548 548 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 PGDP52209 483 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 OR2B6P58173 313 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 PAX5Q02548 391 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ITGADQ13349 1161 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ITIH4Q14624 930 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 TRIP10Q15642 601 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 SBK1Q52WX2 424 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ZNF648Q5T619 568 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 C16orf89Q6UX73 402 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 GPAT4Q86UL3 456 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 TDRPQ86YL5 185 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 AMER2Q8N7J2 671 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 NAT16Q8N8M0 369 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 CPEB3Q8NE35 698 aaKnown RBP7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 NUP43Q8NFH3 380 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 OR4C15Q8NGM1 316 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 CPB2Q96IY4 423 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 C9orf72Q96LT7 481 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 OMDQ99983 421 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 C1QTNF5Q9BXJ0 243 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 HDHD5Q9BXW7 423 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 TRIM15Q9C019 465 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 SLC22A4Q9H015 551 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 RACGAP1Q9H0H5 632 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 C20orf96Q9NUD7 363 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ABCD2Q9UBJ2 740 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 COPS7AQ9UBW8 275 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 SLC23A1Q9UHI7 598 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 NOCTQ9UK39 431 aaKnown RBP7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ATG4BQ9Y4P1 393 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 YTHDC2Q9H6S0 1430 aaKnown RBP7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 FAM90A10PA6NDY2 464 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 NOTOA8MTQ0 251 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 FADS2P1A8MWK0 482 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 RNF223E7ERA6 249 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 P2RY10O00398 339 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 DLGAP1O14490 977 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 CLDN4O14493 209 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 TRAFD1O14545 582 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 PPM1DO15297 605 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 CREG1O75629 220 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 RAD51DO75771 328 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 PIGRP01833 764 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 RPS17P08708 135 aaKnown RBP7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 CCDC166P0CW27 439 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 SLC2A4P14672 509 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ELAVL4P26378 380 aaKnown RBP7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 HNRNPH3P31942 346 aaKnown RBP7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 NPBWR1P48145 328 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 CDK16Q00536 496 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 DBPQ10586 325 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 CMPK2Q5EBM0 449 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 TMEM63BQ5T3F8 832 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 NT5DC1Q5TFE4 455 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ADNP2Q6IQ32 1131 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 PRMT9Q6P2P2 845 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 FAM159AQ6UWV7 190 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 PID1Q7Z2X4 250 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 GID4Q8IVV7 300 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 STHQ8IWL8 128 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 LAX1Q8IWV1 398 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 CCDC185Q8N715 623 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 PYDC1Q8WXC3 89 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 WBP2Q969T9 261 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 TP53INP1Q96A56 240 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ZNF668Q96K58 619 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 MYADMQ96S97 322 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 ZDHHC4Q9NPG8 344 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 NARFQ9UHQ1 456 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 DYRK1BQ9Y463 629 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 PTGDR2Q9Y5Y4 395 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 NPTNQ9Y639 398 aa7.11□□□□□ -1.27
PDGFRA-206ENST00000508170 PNPLA6Q8IY17 1366 aa7.1□□□□□ -1.27
PDGFRA-206ENST00000508170 TCRBV7S2A1N4TA0A589 114 aa7.1□□□□□ -1.27
PDGFRA-206ENST00000508170 PDXKO00764 312 aa7.1□□□□□ -1.27
PDGFRA-206ENST00000508170 PTGESO14684 152 aa7.1□□□□□ -1.27
PDGFRA-206ENST00000508170 KIAA0391O15091 583 aaKnown RBP7.1□□□□□ -1.27
PDGFRA-206ENST00000508170 TIMM8AO60220 97 aaPredicted RBP7.1□□□□□ -1.27
PDGFRA-206ENST00000508170 ACSL3O95573 720 aa7.1□□□□□ -1.27
PDGFRA-206ENST00000508170 DHFRP00374 187 aa7.1□□□□□ -1.27
PDGFRA-206ENST00000508170 GSTA2P09210 222 aa7.1□□□□□ -1.27
PDGFRA-206ENST00000508170 SYT1P21579 422 aa7.1□□□□□ -1.27
PDGFRA-206ENST00000508170 BDKRB2P30411 391 aa7.1□□□□□ -1.27
PDGFRA-206ENST00000508170 OR1E1P30953 314 aa7.1□□□□□ -1.27
PDGFRA-206ENST00000508170 PCBP4P57723 403 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms