RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 USP45Q70EL2 814 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 CREB3L2Q70SY1 520 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 IKBIPQ70UQ0 350 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF551Q7Z340 670 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 DDX53Q86TM3 631 aaKnown RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 FAM124AQ86V42 546 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 NLGN4XQ8N0W4 816 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 C10orf111Q8N326 155 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ATAD1Q8NBU5 361 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TTC16Q8NEE8 873 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 KLHDC9Q8NEP7 349 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ELOA3Q8NG57 546 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR8J1Q8NGP2 316 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 CDC26Q8NHZ8 85 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 SUN5Q8TC36 379 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 LKAAEAR1Q8TD35 194 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 PPP1R13LQ8WUF5 828 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 NUDT8Q8WV74 236 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 NR4A3Q92570 626 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 UBE2FQ969M7 185 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 UBE2E3Q969T4 207 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC25A46Q96AG3 418 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 SH3KBP1Q96B97 665 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 AP2M1Q96CW1 435 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 MYEOVQ96EZ4 313 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ASIC4Q96FT7 647 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZC3HAV1LQ96H79 300 aaKnown RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 MSLNLQ96KJ4 702 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 DHRS1Q96LJ7 313 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 KCTD7Q96MP8 289 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 FOPNLQ96NB1 174 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 SAMD11Q96NU1 681 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 OPALINQ96PE5 141 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 LYSMD1Q96S90 227 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 SDHCQ99643 169 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 MYOCQ99972 504 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TCF25Q9BQ70 676 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC35A5Q9BS91 424 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 SYT17Q9BSW7 474 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 BOCQ9BWV1 1114 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 GTPBP2Q9BX10 602 aaKnown RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TEX12Q9BXU0 123 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ARHGAP39Q9C0H5 1083 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ROGDIQ9GZN7 287 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 FAM83DQ9H4H8 585 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 REEP4Q9H6H4 257 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 RNF121Q9H920 327 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 FZD3Q9NPG1 666 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 NMRK2Q9NPI5 230 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 GIMAP4Q9NUV9 329 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 C14orf119Q9NWQ9 140 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ERVK13-1Q9NX77 482 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 PAQR5Q9NXK6 330 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 PTTG3PQ9NZH4 202 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TRPM5Q9NZQ8 1165 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 FTSJ1Q9UET6 329 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 NDOR1Q9UHB4 597 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 AFF4Q9UHB7 1163 aaKnown RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF451Q9Y4E5 1061 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 PCDHGB7Q9Y5F8 929 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 CFAP20Q9Y6A4 193 aaKnown RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 PRSS21Q9Y6M0 314 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TDRD15B5MCY1 1934 aaKnown RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ANKRD12Q6UB98 2062 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 IGLV3-16A0A075B6K0 115 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 TEX51A0A1B0GUA7 166 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GNG14A0A1W2PPG7 69 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 TRBC2A0A5B9 178 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF840PA6NDX5 716 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR6C70A6NIJ9 312 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GABRR3A8MPY1 467 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GFYI3L273 518 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 FOXE1O00358 373 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GAPDHSO14556 408 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GNB5O14775 395 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC30A4O14863 429 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CHST10O43529 356 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 NDUFB5O43674 189 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 TSPAN3O60637 253 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC19A2O60779 497 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 TBL1XO60907 577 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 NBNO60934 754 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 NOS1APO75052 506 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC43A1O75387 559 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 TNFRSF21O75509 655 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GPX5O75715 221 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 SNAPC5O75971 98 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CLDN7O95471 211 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 RAB36O95755 333 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CRYZL1O95825 349 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 IGHA1P01876 353 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 HLA-DQB1P01920 261 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 C1QBP02746 253 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 CATP04040 527 aaKnown RBP4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 RB1P06400 928 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GSTM1P09488 218 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 ALPIP09923 528 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 GAAP10253 952 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 NR2F6P10588 404 aa4.74□□□□□ -1.65
HMGB3P16-201ENST00000508037 LAMP1P11279 417 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms