RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 ZNF444Q8N0Y2 327 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 THEM5Q8N1Q8 247 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 CCDC185Q8N715 623 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 MINDY2Q8NBR6 621 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 TMEM104Q8NE00 496 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 OR52L2PQ8NGH6 319 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 CCDC26Q8TAB7 109 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 FANK1Q8TC84 345 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 PPP4R1Q8TF05 950 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 LIPHQ8WWY8 451 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 TRIB2Q92519 343 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 NPIPB3Q92617 1050 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 SLC38A4Q969I6 547 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 STAMBPL1Q96FJ0 436 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 MARK4Q96L34 752 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF317Q96PQ6 595 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 VPS35Q96QK1 796 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 NPAS2Q99743 824 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 CLSTN3Q9BQT9 956 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 TTYH2Q9BSA4 534 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 LRRC1Q9BTT6 524 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 TM6SF2Q9BZW4 377 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 MFFQ9GZY8 342 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 LRMDAQ9H2I8 198 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 RHBGQ9H310 441 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 FOXP1Q9H334 677 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 BICC1Q9H694 974 aaKnown RBP3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 CXorf36Q9H7Y0 433 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 GEMIN7Q9H840 131 aaKnown RBP3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 KCNMB3Q9NPA1 279 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 C8orf4Q9NR00 106 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 DYRK4Q9NR20 520 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 BICRAQ9NZM4 1560 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 COPS7AQ9UBW8 275 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 CHRNA9Q9UGM1 479 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 TTC7AQ9ULT0 858 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 RPH3ALQ9UNE2 315 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 SH3GLB1Q9Y371 365 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 GRIP1Q9Y3R0 1128 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 STON1Q9Y6Q2 735 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 CECR2Q9BXF3 1484 aa3.4□□□□□ -1.87
HMGB3P15-201ENST00000507326 TOP2AP11388 1531 aaKnown RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 TRAV26-1A0A087WT03 109 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 A0A1B0GUH1 482 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 MGAT4DA6NG13 374 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 OR6C70A6NIJ9 312 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 GOLGA8JA6NMD2 632 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 GABRR3A8MPY1 467 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 PPIAL4DF5H284 164 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 TRIM77I1YAP6 450 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 GOLGA8RI6L899 631 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 M0QYT0 321 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 INPPL1O15357 1258 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 FLRT2O43155 660 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 IDH3BO43837 385 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 DFNA5O60443 496 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 JAK2O60674 1132 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 GLRA3O75311 464 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 PMPCBO75439 489 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF189O75820 626 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 OR4F21O95013 312 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 MOCS2O96007 188 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ADAP00813 363 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ALPLP05186 524 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ICAM1P05362 532 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 SERPINF2P08697 491 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ANXA5P08758 320 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 GSTA2P09210 222 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ANXA4P09525 319 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ENO3P13929 434 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ACADSP16219 412 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 CAPN2P17655 700 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 IGFBP2P18065 325 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 S1PR1P21453 382 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 IL32P24001 234 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 UCP1P25874 307 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 PPP2R1AP30153 589 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 SSTR1P30872 391 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 SLC8A1P32418 973 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ADRA1AP35348 466 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 FDFT1P37268 417 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 NAA10P41227 235 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 MAGEA2P43356 314 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 PTPN9P43378 593 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 CBX5P45973 191 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 GPR4P46093 362 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 SLC9A3P48764 834 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 NDST1P52848 882 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 PTENP60484 403 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 PSMC5P62195 406 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 CSNK1G2P78368 415 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 DLK1P80370 383 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 RHAGQ02094 409 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF91Q05481 1191 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 CHRNB3Q05901 458 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ITGADQ13349 1161 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ORC2Q13416 577 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 SELPLGQ14242 412 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 PON2Q15165 354 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 LY6KQ17RY6 165 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms