RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 MAL2Q969L2 176 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 MAGED4Q96JG8 741 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 APOL4Q9BPW4 351 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 AMBRA1Q9C0C7 1298 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 SRMSQ9H3Y6 488 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 SCHIP1Q9P0W5 487 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 RSL24D1Q9UHA3 163 aaKnown RBP16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 ENTPD2Q9Y5L3 495 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 ISM1B1AKI9 464 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 hCG_2039718K7EN88 272 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 BCKDKO14874 412 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 HAT1O14929 419 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 DNAJB5O75953 348 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 CCDC159P0C7I6 412 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 PEBP1P30086 187 aaKnown RBP16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 ACTR1BP42025 376 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 CDK9P50750 372 aaKnown RBP16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 CRYBA2P53672 197 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 ACTR1AP61163 376 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 GNA13Q14344 377 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 SKIV2LQ15477 1246 aaKnown RBP16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 SPDYE7PQ495Y7 208 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 NDUFAF5Q5TEU4 345 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 ABI3BPQ7Z7G0 1075 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 PAQR7Q86WK9 346 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 SAMD14Q8IZD0 417 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 GAL3ST3Q96A11 431 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 TEFMQ96QE5 360 aaKnown RBP16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 PSD2Q9BQI7 771 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 SLC35C2Q9NQQ7 365 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 SLC2A4RGQ9NR83 387 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 GIMAP4Q9NUV9 329 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 POT1Q9NUX5 634 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 URADA6NGE7 173 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 CCDC160A6NGH7 325 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 ZW10O43264 779 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 TNFSF14O43557 240 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 MRPS14O60783 128 aaKnown RBP16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 GCM2O75603 506 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 CLIC3O95833 236 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 TNFP01375 233 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 C1QCP02747 245 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 SERPIND1P05546 499 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 JUNBP17275 347 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 NELFEP18615 380 aaKnown RBP16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 CXCR4P61073 352 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 KCNC4Q03721 635 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 PRSS53Q2L4Q9 553 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 CEACAM20Q6UY09 585 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 ZNF420Q8TAQ5 688 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 SPPL2AQ8TCT8 520 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 C17orf62Q9BQA9 187 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 GSDMCQ9BYG8 508 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 VNN3Q9NY84 501 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 PDP1Q9P0J1 537 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 KLK4Q9Y5K2 254 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 SNX8Q9Y5X2 465 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 CEPT1Q9Y6K0 416 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 U3KQV3 271 aa16.41■□□□□ 0.22
TRAPPC11-204ENST00000505676 ERI3O43414 337 aaKnown RBP16.4■□□□□ 0.22
TRAPPC11-204ENST00000505676 ANXA8P13928 327 aa16.4■□□□□ 0.22
TRAPPC11-204ENST00000505676 PLA2G16P53816 162 aa16.4■□□□□ 0.22
TRAPPC11-204ENST00000505676 ROR2Q01974 943 aaKnown RBP16.4■□□□□ 0.22
TRAPPC11-204ENST00000505676 PLCL1Q15111 1095 aa16.4■□□□□ 0.22
TRAPPC11-204ENST00000505676 TOR1AIP1Q5JTV8 583 aa16.4■□□□□ 0.22
TRAPPC11-204ENST00000505676 C6orf141Q5SZD1 244 aa16.4■□□□□ 0.22
TRAPPC11-204ENST00000505676 KIAA0895LQ68EN5 471 aa16.4■□□□□ 0.22
TRAPPC11-204ENST00000505676 TAMM41Q96BW9 452 aa16.4■□□□□ 0.22
TRAPPC11-204ENST00000505676 ZNF300Q96RE9 604 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC11-204ENST00000505676 PRDM7Q9NQW5 492 aa16.4■□□□□ 0.22
TRAPPC11-204ENST00000505676 SIRT3Q9NTG7 399 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC11-204ENST00000505676 ACSL6Q9UKU0 697 aa16.4■□□□□ 0.22
TRAPPC11-204ENST00000505676 ARRDC5A6NEK1 342 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 M0QX08 132 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 OR6B1O95007 311 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 RASGRP1O95267 797 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 CPNE6O95741 557 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 ATP5A1P25705 553 aaKnown RBP16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 CSNK2BP67870 215 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 HYAL2Q12891 473 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 TUBA3CQ13748 450 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 ISLR2Q6UXK2 745 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 C6orf120Q7Z4R8 191 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 RBM12BQ8IXT5 1001 aaKnown RBP16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 HS3ST5Q8IZT8 346 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 FBXL6Q8N531 539 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 OR5AK3PQ8NH89 298 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 EXOSC8Q96B26 276 aaKnown RBP16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 ZNF607Q96SK3 696 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 KRT84Q9NSB2 600 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 TEX10Q9NXF1 929 aaPredicted RBP16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 NDUFAF4Q9P032 175 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 ZNF624Q9P2J8 865 aaPredicted RBP16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 PSME2Q9UL46 239 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 ENTPD4Q9Y227 616 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 FAM32AQ9Y421 112 aaKnown RBP16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 ASB4Q9Y574 426 aa16.39■□□□□ 0.22
TRAPPC11-204ENST00000505676 KIR2DS5A0A0G2JLQ3 304 aa16.39■□□□□ 0.21
TRAPPC11-204ENST00000505676 A0A0G2JNG1 304 aa16.39■□□□□ 0.21
TRAPPC11-204ENST00000505676 A0A1B0GTW7 788 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms