RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 PTCD3Q96EY7 689 aaKnown RBP12.23□□□□□ -0.45
DDX41-204ENST00000504807 TSPAN17Q96FV3 270 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 GPR78Q96P69 363 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 MAPKAP1Q9BPZ7 522 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 MS4A8Q9BY19 250 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 CLK4Q9HAZ1 481 aaKnown RBP12.23□□□□□ -0.45
DDX41-204ENST00000504807 PRTFDC1Q9NRG1 225 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 RNF112Q9ULX5 631 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 DAPP1Q9UN19 280 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 PRRC2AP48634 2157 aaKnown RBP12.23□□□□□ -0.45
DDX41-204ENST00000504807 FLNAP21333 2647 aaKnown RBP12.22□□□□□ -0.45
DDX41-204ENST00000504807 URADA6NGE7 173 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 WASHC1A8K0Z3 465 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 PSMD12O00232 456 aaPredicted RBP12.22□□□□□ -0.45
DDX41-204ENST00000504807 ADAM10O14672 748 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 KERAO60938 352 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 LDB3O75112 727 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 H2AFYO75367 372 aaKnown RBP12.22□□□□□ -0.45
DDX41-204ENST00000504807 TGFB1P01137 390 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 GSTA2P09210 222 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 CASP2P42575 452 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 MSH2P43246 934 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 GPR85P60893 370 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 ALDH6A1Q02252 535 aaKnown RBP12.22□□□□□ -0.45
DDX41-204ENST00000504807 MAPKAPK3Q16644 382 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 CDKL4Q5MAI5 379 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 NIPAL1Q6NVV3 410 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 MTFR2Q6P444 385 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 XKRXQ6PP77 449 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 C3P1Q6ZMU1 363 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 Q6ZPB1 254 aaPredicted RBP12.22□□□□□ -0.45
DDX41-204ENST00000504807 SULF2Q8IWU5 870 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 KRT78Q8N1N4 520 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 PLD6Q8N2A8 252 aaKnown RBP12.22□□□□□ -0.45
DDX41-204ENST00000504807 TCAIMQ8N3R3 496 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 DOK4Q8TEW6 326 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 UBTD2Q8WUN7 234 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 CDKL2Q92772 493 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 UCN3Q969E3 161 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 ANKRD9Q96BM1 317 aaPredicted RBP12.22□□□□□ -0.45
DDX41-204ENST00000504807 NPLQ9BXD5 320 aaPredicted RBP12.22□□□□□ -0.45
DDX41-204ENST00000504807 ZNF717Q9BY31 904 aaPredicted RBP12.22□□□□□ -0.45
DDX41-204ENST00000504807 PHACTR1Q9C0D0 580 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 ZNF358Q9NW07 568 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 NINJ2Q9NZG7 142 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 MMACHCQ9Y4U1 282 aa12.22□□□□□ -0.45
DDX41-204ENST00000504807 NSD1Q96L73 2696 aaPredicted RBP12.21□□□□□ -0.45
DDX41-204ENST00000504807 ANKDD1BA6NHY2 528 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 SUPT3HB4E1H0 165 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 HRKO00198 91 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 CLGNO14967 610 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 B3GALT2O43825 422 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 SUPT3HO75486 399 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 ITGA10O75578 1167 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 ETHE1O95571 254 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 ALDOAP04075 364 aaKnown RBP12.21□□□□□ -0.45
DDX41-204ENST00000504807 C2P06681 752 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 LTA4HP09960 611 aaKnown RBP12.21□□□□□ -0.45
DDX41-204ENST00000504807 CD46P15529 392 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 ATP5A1P25705 553 aaKnown RBP12.21□□□□□ -0.45
DDX41-204ENST00000504807 ECHS1P30084 290 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 SPRP35270 261 aaPredicted RBP12.21□□□□□ -0.45
DDX41-204ENST00000504807 HLCSP50747 726 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 MTTPP55157 894 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 HSD17B7P56937 341 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 TAS2R50P59544 299 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 IRF8Q02556 426 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 SLC13A2Q13183 592 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 TBCCQ15814 346 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 MROH9Q5TGP6 573 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 LRRC70Q7Z2Q7 622 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 OR4N5Q8IXE1 308 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 LAS2Q8IYD9 372 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 NOA1Q8NC60 698 aaKnown RBP12.21□□□□□ -0.45
DDX41-204ENST00000504807 CHDHQ8NE62 594 aaPredicted RBP12.21□□□□□ -0.45
DDX41-204ENST00000504807 TTLQ8NG68 377 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 OR7G3Q8NG95 312 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 FAR2Q96K12 515 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 SERINC2Q96SA4 455 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 EFCAB11Q9BUY7 163 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 DEFB126Q9BYW3 111 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 OR51B5Q9H339 312 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 SNX15Q9NRS6 342 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 NUDT4Q9NZJ9 180 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 TXNDC16Q9P2K2 825 aa12.21□□□□□ -0.45
DDX41-204ENST00000504807 DMGDHQ9UI17 866 aaKnown RBP12.21□□□□□ -0.45
DDX41-204ENST00000504807 UTP11Q9Y3A2 253 aaKnown RBP12.21□□□□□ -0.45
DDX41-204ENST00000504807 NCOA6Q14686 2063 aaPredicted RBP12.2□□□□□ -0.46
DDX41-204ENST00000504807 A0A1W2PS29 197 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 ASNA1O43681 348 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 FGF17O60258 216 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 OR2J2O76002 312 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 OR6B1O95007 311 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 SCELO95171 688 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 SIX3O95343 332 aaPredicted RBP12.2□□□□□ -0.46
DDX41-204ENST00000504807 C8BP07358 591 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 PCNAP12004 261 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 CYB561P49447 251 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 MEOX1P50221 254 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 IST1P53990 364 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms