RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SRFBP1Q8NEF9 429 aaKnown RBP20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 PSMA8Q8TAA3 256 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 C7orf34Q96L11 122 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 DOHHQ9BU89 302 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 IFT80Q9P2H3 777 aaPredicted RBP20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 SNX8Q9Y5X2 465 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 GOLGA4Q13439 2230 aaKnown RBP20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 OR2A25A4D2G3 310 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 TNFSF14O43557 240 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 E2F6O75461 281 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 FKBP9O95302 570 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 PABPC4LP0CB38 370 aaKnown RBP20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 PEX19P40855 299 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 RPL5P46777 297 aaKnown RBP20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 PRIM2P49643 509 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 RPS15AP62244 130 aaKnown RBP20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 SELENOWP63302 87 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 SLAMF1Q13291 335 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 FZD5Q13467 585 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 FZD2Q14332 565 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 PLCL1Q15111 1095 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 SKIV2LQ15477 1246 aaKnown RBP20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 TSTD1Q8NFU3 115 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 OR8K5Q8NH50 307 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 NFKBIDQ8NI38 313 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 GSDMCQ9BYG8 508 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 CA14Q9ULX7 337 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 SNX11Q9Y5W9 270 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 A0A1W2PPC4 97 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 hCG_2039718K7EN88 272 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 ZW10O43264 779 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 DPM1O60762 260 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 THEGLP0DJG4 465 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 UBE2IP63279 158 aaKnown RBP20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 CDK6Q00534 326 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 ZIK1Q3SY52 487 aaPredicted RBP20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 TJAP1Q5JTD0 557 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 ANKRD34AQ69YU3 496 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 PATE1Q8WXA2 126 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 TPD52L3Q96J77 140 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 FAIM2Q9BWQ8 316 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 GABARAPL1Q9H0R8 117 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 CLK4Q9HAZ1 481 aaKnown RBP20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 U3KQV3 271 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 TRIM64A6NGJ6 449 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 B4GALT2O60909 372 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 UGT2B7P16662 529 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 PCBP3P57721 371 aaKnown RBP20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 STXBP1P61764 594 aaKnown RBP20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 EPS8Q12929 822 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 KCTD21Q4G0X4 260 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 CRB2Q5IJ48 1285 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 FBXO42Q6P3S6 717 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 TRIM48Q8IWZ4 208 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 TSPAN14Q8NG11 270 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 TAMM41Q96BW9 452 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 TOR3AQ9H497 397 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 EPB41L1Q9H4G0 881 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 POT1Q9NUX5 634 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 CPNE7Q9UBL6 633 aa20.25■□□□□ 0.83
UBE2D3-216ENST00000503742 A0A1W2PR48 441 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 VIPP01282 170 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 ATP6V1B1P15313 513 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 PRKACGP22612 351 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 CDK9P50750 372 aaKnown RBP20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 ITGA1P56199 1179 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 DSTNP60981 165 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 HSPB3Q12988 150 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 TRIM73Q86UV7 250 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 SLC30A8Q8IWU4 369 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 OFCC1Q8IZS5 231 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 ZFP28Q8NHY6 868 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 NT5CQ8TCD5 201 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 MBOAT4Q96T53 435 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 SLC35C2Q9NQQ7 365 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 ACTR10Q9NZ32 417 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 TMEFF2Q9UIK5 374 aaPredicted RBP20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 PADI2Q9Y2J8 665 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 ATG4BQ9Y4P1 393 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 SLCO1B1Q9Y6L6 691 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 TRIOO75962 3097 aa20.24■□□□□ 0.83
UBE2D3-216ENST00000503742 IGHV1OR15-9A0A0B4J2B8 117 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 A0A1W2PPC1 479 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 AXIN1O15169 862 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 GUCY1B2O75343 617 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 ZNF217O75362 1048 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 DIRAS1O95057 198 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 CELA2BP08218 269 aaPredicted RBP20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 POLR2CP19387 275 aaPredicted RBP20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 ZNF542PQ5EBM4 170 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 CEP68Q76N32 757 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 TSEN54Q7Z6J9 526 aaKnown RBP20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 SATL1Q86VE3 508 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 METTL25Q8N6Q8 603 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 ZFAND2BQ8WV99 257 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 RLN3Q8WXF3 142 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 TM4SF19Q96DZ7 209 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 FCRL4Q96PJ5 515 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 GLIPR2Q9H4G4 154 aa20.23■□□□□ 0.83
UBE2D3-216ENST00000503742 FAM118AQ9NWS6 357 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms