RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 KCNE2Q9Y6J6 123 aa14.86□□□□□ -0.03
MUC1-220ENST00000498431 CLCA3PQ9Y6N3 262 aa14.86□□□□□ -0.03
MUC1-220ENST00000498431 ARHGAP21Q5T5U3 1957 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 NPEPPSL1A6NEC2 478 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 CLDN4O14493 209 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 CERS1P27544 350 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 GDF5P43026 501 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 MAN2A2P49641 1150 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 SLBPQ14493 270 aaKnown RBP eCLIP14.85□□□□□ -0.03
MUC1-220ENST00000498431 CYP1B1Q16678 543 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 SLC25A35Q3KQZ1 300 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 C1orf185Q5T7R7 199 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 TEDDM1Q5T9Z0 273 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 RNASEH2BQ5TBB1 312 aaKnown RBP14.85□□□□□ -0.03
MUC1-220ENST00000498431 ADNP2Q6IQ32 1131 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 SLCO4C1Q6ZQN7 724 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 VN1R5Q7Z5H4 357 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 PPIL6Q8IXY8 311 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 ZNF595Q8IYB9 648 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 CERS2Q96G23 380 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 PDLIM5Q96HC4 596 aaKnown RBP14.85□□□□□ -0.03
MUC1-220ENST00000498431 OR8D2Q9GZM6 311 aa14.85□□□□□ -0.03
MUC1-220ENST00000498431 RPH3AQ9Y2J0 694 aaPredicted RBP14.85□□□□□ -0.03
MUC1-220ENST00000498431 B3GALT2O43825 422 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 SUSD5O60279 629 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 WDR1O75083 606 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 C1GALT1C1LP0DN25 315 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 PIGAP37287 484 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 KIR2DL3P43628 341 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 LIM2P55344 173 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 RNF4P78317 190 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 ADAM8P78325 824 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 ZNF460Q14592 562 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 SLC10A1Q14973 349 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 HYAL4Q2M3T9 481 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 SPANXN3Q5MJ09 141 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 TRMT10BQ6PF06 316 aaKnown RBP14.84□□□□□ -0.03
MUC1-220ENST00000498431 TMIGD1Q6UXZ0 262 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 SEM1Q6ZVN7 128 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 GALNT7Q86SF2 657 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 CDC20BQ86Y33 519 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 C17orf53Q8N3J3 647 aaPredicted RBP14.84□□□□□ -0.03
MUC1-220ENST00000498431 RASGEF1CQ8N431 466 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 GOLM1Q8NBJ4 401 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 RELL2Q8NC24 303 aaPredicted RBP14.84□□□□□ -0.03
MUC1-220ENST00000498431 MORN4Q8NDC4 146 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 RMND5BQ96G75 393 aaPredicted RBP14.84□□□□□ -0.03
MUC1-220ENST00000498431 EGFL8Q99944 293 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 ALOXE3Q9BYJ1 711 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 LDAHQ9H6V9 325 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 SACM1LQ9NTJ5 587 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 VTI1BQ9UEU0 232 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 DAPP1Q9UN19 280 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 MRPS33Q9Y291 106 aaKnown RBP14.84□□□□□ -0.03
MUC1-220ENST00000498431 ATG4BQ9Y4P1 393 aa14.84□□□□□ -0.03
MUC1-220ENST00000498431 NSD1Q96L73 2696 aaPredicted RBP14.84□□□□□ -0.03
MUC1-220ENST00000498431 KDM4EB2RXH2 506 aaPredicted RBP14.83□□□□□ -0.04
MUC1-220ENST00000498431 LDB3O75112 727 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 WDR47O94967 919 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 TTC4O95801 387 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 RFPL3SP0C7P2 107 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 ZNF37AP17032 561 aaPredicted RBP14.83□□□□□ -0.04
MUC1-220ENST00000498431 DNASE1P24855 282 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 ID2Q02363 134 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 ADPRMQ3LIE5 342 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 BBS9Q3SYG4 887 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 HP1BP3Q5SSJ5 553 aaPredicted RBP14.83□□□□□ -0.04
MUC1-220ENST00000498431 WLSQ5T9L3 541 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 RIPPLY2Q5TAB7 128 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 FAM45BPQ6NSW5 357 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 ADGRD1Q6QNK2 874 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 OR2L5Q8NG80 312 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 OR14A16Q8NHC5 309 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 GABPB2Q8TAK5 448 aaPredicted RBP14.83□□□□□ -0.04
MUC1-220ENST00000498431 FAM45AQ8TCE6 357 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 SLC2A12Q8TD20 617 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 DAZLQ92904 295 aaKnown RBP14.83□□□□□ -0.04
MUC1-220ENST00000498431 SARAFQ96BY9 339 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 ALPK1Q96QP1 1244 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 REXO4Q9GZR2 422 aaKnown RBP14.83□□□□□ -0.04
MUC1-220ENST00000498431 PPANQ9NQ55 473 aaKnown RBP14.83□□□□□ -0.04
MUC1-220ENST00000498431 DMRT3Q9NQL9 472 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 JRKLQ9Y4A0 524 aa14.83□□□□□ -0.04
MUC1-220ENST00000498431 TRGV5A0A0B4J1U4 118 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 A6NNC1 897 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 C17orf105B2RV13 164 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 PRAMEF4O60810 478 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 CTNSO60931 367 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 FAM155BO75949 473 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 ETHE1O95571 254 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 P04436 131 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 DRD2P14416 443 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 GNAZP19086 355 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 UQCRC1P31930 480 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 DEKP35659 375 aaKnown RBP14.82□□□□□ -0.04
MUC1-220ENST00000498431 SLC6A12P48065 614 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 ASPHQ12797 758 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 PRAMEF9Q5VWM5 478 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 ABHD17CQ6PCB6 329 aa14.82□□□□□ -0.04
MUC1-220ENST00000498431 SLC35F6Q8N357 371 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms