RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 NTMT1Q9BV86 223 aa1.97□□□□□ -2.09
RBM39-242ENST00000498280 MRPL9Q9BYD2 267 aaKnown RBP1.97□□□□□ -2.09
RBM39-242ENST00000498280 LRRC2Q9BYS8 371 aa1.97□□□□□ -2.09
RBM39-242ENST00000498280 NAPBQ9H115 298 aa1.97□□□□□ -2.09
RBM39-242ENST00000498280 ZNF665Q9H7R5 613 aa1.97□□□□□ -2.09
RBM39-242ENST00000498280 MID1IP1Q9NPA3 183 aa1.97□□□□□ -2.09
RBM39-242ENST00000498280 IL1RAPQ9NPH3 570 aa1.97□□□□□ -2.09
RBM39-242ENST00000498280 DNAJC11Q9NVH1 559 aa1.97□□□□□ -2.09
RBM39-242ENST00000498280 NDE1Q9NXR1 346 aa1.97□□□□□ -2.09
RBM39-242ENST00000498280 THAP10Q9P2Z0 257 aaPredicted RBP1.97□□□□□ -2.09
RBM39-242ENST00000498280 KLK11Q9UBX7 282 aa1.97□□□□□ -2.09
RBM39-242ENST00000498280 MRPS18CQ9Y3D5 142 aaKnown RBP1.97□□□□□ -2.09
RBM39-242ENST00000498280 OR1A2Q9Y585 309 aa1.97□□□□□ -2.09
RBM39-242ENST00000498280 LOC105371242A0A075B767 164 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 IGHV3-38A0A0C4DH36 116 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 ATP6AP2A0A1C7CYW4 349 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 SLC15A5A6NIM6 579 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 TCP10L2B9ZVM9 353 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 RNF103O00237 685 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 SOCS3O14543 225 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 PSMD3O43242 534 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 ZNF749O43361 778 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 SNAP91O60641 907 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 STBD1O95210 358 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 GAS8O95995 478 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 TNFSF10P50591 281 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 NDST2P52849 883 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 UBXN1Q04323 297 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 AP1B1Q10567 949 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 LCP2Q13094 533 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 RPA4Q13156 261 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 KIAA0141Q14154 515 aaPredicted RBP1.96□□□□□ -2.1
RBM39-242ENST00000498280 GIT2Q14161 759 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 LY6DQ14210 128 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 GK2Q14410 553 aaPredicted RBP1.96□□□□□ -2.1
RBM39-242ENST00000498280 SPHARQ15513 63 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 STXBP2Q15833 593 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 TAF1BQ53T94 588 aaPredicted RBP1.96□□□□□ -2.1
RBM39-242ENST00000498280 C2CD6Q53TS8 623 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 NEPROQ6NW34 567 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 C3P1Q6ZMU1 363 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 RAPH1Q70E73 1250 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 NLRP14Q86W24 1093 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 CACUL1Q86Y37 369 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 ERC1Q8IUD2 1116 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 CNTN4Q8IWV2 1026 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 ELMOD1Q8N336 334 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 CCDC197Q8NCU1 140 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 PRSS33Q8NF86 280 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 OR10G7Q8NGN6 311 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 GTF3AQ92664 365 aaKnown RBP1.96□□□□□ -2.1
RBM39-242ENST00000498280 PRCCQ92733 491 aaPredicted RBP1.96□□□□□ -2.1
RBM39-242ENST00000498280 HAS2Q92819 552 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 C5orf30Q96GV9 206 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 CCDC43Q96MW1 224 aaKnown RBP1.96□□□□□ -2.1
RBM39-242ENST00000498280 PARLQ9H300 379 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 ZDHHC6Q9H6R6 413 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 MAGEF1Q9HAY2 307 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 PLEKHA3Q9HB20 300 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 S100A14Q9HCY8 104 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 PLEK2Q9NYT0 353 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 ZNF319Q9P2F9 582 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 KCNK6Q9Y257 313 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 EXOC6BQ9Y2D4 811 aa1.96□□□□□ -2.1
RBM39-242ENST00000498280 SH3PXD2BA1X283 911 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 TRIM64A6NGJ6 449 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 TRIM64BA6NI03 449 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 SHISA7A6NL88 538 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 EPM2AB3EWF7 344 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 TFECO14948 347 aaPredicted RBP1.95□□□□□ -2.1
RBM39-242ENST00000498280 INPP4BO15327 924 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 TNFSF12O43508 249 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 VEGFDO43915 354 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 KERAO60938 352 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 GMNNO75496 209 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 MTRF1O75570 445 aaKnown RBP1.95□□□□□ -2.1
RBM39-242ENST00000498280 CPNE6O95741 557 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 FGF19O95750 216 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 LYNP07948 512 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 TRIM49P0CI25 452 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 TRIM49CP0CI26 452 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 VDRP11473 427 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 P4HA1P13674 534 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 CD1DP15813 335 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 UGT1A6P19224 532 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 GPX3P22352 226 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 PEX3P56589 373 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 TRA2BP62995 288 aaKnown RBP1.95□□□□□ -2.1
RBM39-242ENST00000498280 NPRL3Q12980 569 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 GCKRQ14397 625 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 MLF2Q15773 248 aaPredicted RBP1.95□□□□□ -2.1
RBM39-242ENST00000498280 KNOP1Q1ED39 458 aaKnown RBP1.95□□□□□ -2.1
RBM39-242ENST00000498280 WSCD2Q2TBF2 565 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 C2orf76Q3KRA6 126 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 SNRNP48Q6IEG0 339 aaKnown RBP1.95□□□□□ -2.1
RBM39-242ENST00000498280 CAPN13Q6MZZ7 669 aaPredicted RBP1.95□□□□□ -2.1
RBM39-242ENST00000498280 TRIM65Q6PJ69 517 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 PAQR6Q6TCH4 344 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 GPRIN3Q6ZVF9 776 aa1.95□□□□□ -2.1
RBM39-242ENST00000498280 KCNMB4Q86W47 210 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms