RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ARHGEF37A1IGU5 675 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 IGLON5A6NGN9 336 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 FBP2O00757 339 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 P2RX6O15547 441 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 FRAT2O75474 233 aaPredicted RBP2.6□□□□□ -1.99
SMC4-227ENST00000497984 OR6B1O95007 311 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 PDGFBP01127 241 aaPredicted RBP2.6□□□□□ -1.99
SMC4-227ENST00000497984 HSP90AA1P07900 732 aaKnown RBP2.6□□□□□ -1.99
SMC4-227ENST00000497984 HCKP08631 526 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 CASTP20810 708 aaKnown RBP2.6□□□□□ -1.99
SMC4-227ENST00000497984 SRD5A2P31213 254 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 SOAT1P35610 550 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 NPBWR1P48145 328 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 SLC1A6P48664 564 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 BACE1P56817 501 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 SCN1BQ07699 218 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 ECSCRQ19T08 205 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 ZNF776Q68DI1 518 aaPredicted RBP2.6□□□□□ -1.99
SMC4-227ENST00000497984 TRAT1Q6PIZ9 186 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 C17orf107Q6ZR85 190 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 Q71RC1 249 aaPredicted RBP2.6□□□□□ -1.99
SMC4-227ENST00000497984 METTL23Q86XA0 190 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 TBC1D10CQ8IV04 446 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 CLEC1AQ8NC01 280 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 OR13C5Q8NGS8 318 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 LIPHQ8WWY8 451 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 SLC35C1Q96A29 364 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 GBP5Q96PP8 586 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 INTS14Q96SY0 518 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 SLCO1C1Q9NYB5 712 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 TMOD3Q9NYL9 352 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 IL17CQ9P0M4 197 aa2.6□□□□□ -1.99
SMC4-227ENST00000497984 YDJCA8MPS7 323 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 KBTBD13C9JR72 458 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 ANHXE9PGG2 379 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 ACSL4O60488 711 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 SELENOFO60613 162 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 SEMA4FO95754 770 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 IFNAR1P17181 557 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 ACKR3P25106 362 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 SPRP35270 261 aaPredicted RBP2.59□□□□□ -1.99
SMC4-227ENST00000497984 RBBP4Q09028 425 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 ABRQ12979 859 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 ITPK1Q13572 414 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 CEACAM7Q14002 265 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 CASC4Q6P4E1 433 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 NUFIP2Q7Z417 695 aaKnown RBP2.59□□□□□ -1.99
SMC4-227ENST00000497984 TDHQ8IZJ6 230 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 ZNF444Q8N0Y2 327 aaPredicted RBP2.59□□□□□ -1.99
SMC4-227ENST00000497984 PCNPQ8WW12 178 aaKnown RBP2.59□□□□□ -1.99
SMC4-227ENST00000497984 CKAP2Q8WWK9 683 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 SMPDL3AQ92484 453 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 BPIFA2Q96DR5 249 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 SGF29Q96ES7 293 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 ANKRD27Q96NW4 1050 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 RCHY1Q96PM5 261 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 TNFRSF13CQ96RJ3 184 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 MINDY3Q9H8M7 445 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 S100A14Q9HCY8 104 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 UBE2TQ9NPD8 197 aaPredicted RBP2.59□□□□□ -1.99
SMC4-227ENST00000497984 Q9UF83 564 aa2.59□□□□□ -1.99
SMC4-227ENST00000497984 NIP7Q9Y221 180 aaKnown RBP eCLIP2.59□□□□□ -1.991e-7■■■■■ 83.2
SMC4-227ENST00000497984 ANKDD1BA6NHY2 528 aa2.58□□□□□ -2
SMC4-227ENST00000497984 CCSO14618 274 aa2.58□□□□□ -2
SMC4-227ENST00000497984 TIMM44O43615 452 aa2.58□□□□□ -2
SMC4-227ENST00000497984 RLN1P04808 185 aa2.58□□□□□ -2
SMC4-227ENST00000497984 SCG2P13521 617 aa2.58□□□□□ -2
SMC4-227ENST00000497984 ZNF32P17041 273 aa2.58□□□□□ -2
SMC4-227ENST00000497984 CCL14Q16627 93 aa2.58□□□□□ -2
SMC4-227ENST00000497984 TMEM44Q2T9K0 475 aa2.58□□□□□ -2
SMC4-227ENST00000497984 HERC4Q5GLZ8 1057 aaPredicted RBP2.58□□□□□ -2
SMC4-227ENST00000497984 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
SMC4-227ENST00000497984 PET117Q6UWS5 81 aa2.58□□□□□ -2
SMC4-227ENST00000497984 PAMR1Q6UXH9 720 aa2.58□□□□□ -2
SMC4-227ENST00000497984 MSANTD1Q6ZTZ1 278 aa2.58□□□□□ -2
SMC4-227ENST00000497984 CARNMT1Q8N4J0 409 aa2.58□□□□□ -2
SMC4-227ENST00000497984 FLVCR1-AS1Q8TAF5 88 aa2.58□□□□□ -2
SMC4-227ENST00000497984 ESAMQ96AP7 390 aa2.58□□□□□ -2
SMC4-227ENST00000497984 BSCL2Q96G97 398 aaPredicted RBP2.58□□□□□ -2
SMC4-227ENST00000497984 RUNDC3BQ96NL0 473 aa2.58□□□□□ -2
SMC4-227ENST00000497984 HSD17B14Q9BPX1 270 aa2.58□□□□□ -2
SMC4-227ENST00000497984 C17orf62Q9BQA9 187 aa2.58□□□□□ -2
SMC4-227ENST00000497984 LSG1Q9H089 658 aaKnown RBP2.58□□□□□ -2
SMC4-227ENST00000497984 PLEKHA3Q9HB20 300 aa2.58□□□□□ -2
SMC4-227ENST00000497984 GIMAP2Q9UG22 337 aa2.58□□□□□ -2
SMC4-227ENST00000497984 ITGA11Q9UKX5 1188 aa2.58□□□□□ -2
SMC4-227ENST00000497984 MGAT4AQ9UM21 535 aa2.58□□□□□ -2
SMC4-227ENST00000497984 GPR132Q9UNW8 380 aa2.58□□□□□ -2
SMC4-227ENST00000497984 SALL1Q9NSC2 1324 aa2.58□□□□□ -2
SMC4-227ENST00000497984 TRAV34A0A0B4J273 112 aa2.57□□□□□ -2
SMC4-227ENST00000497984 M0R296 226 aa2.57□□□□□ -2
SMC4-227ENST00000497984 KBTBD11O94819 623 aa2.57□□□□□ -2
SMC4-227ENST00000497984 SUPT20HL2P0C7V6 817 aa2.57□□□□□ -2
SMC4-227ENST00000497984 PRKCIP41743 596 aa2.57□□□□□ -2
SMC4-227ENST00000497984 MATKP42679 507 aa2.57□□□□□ -2
SMC4-227ENST00000497984 FOLH1Q04609 750 aa2.57□□□□□ -2
SMC4-227ENST00000497984 SLC3A1Q07837 685 aa2.57□□□□□ -2
SMC4-227ENST00000497984 CYLC2Q14093 348 aaPredicted RBP2.57□□□□□ -2
SMC4-227ENST00000497984 PSMD6Q15008 389 aa2.57□□□□□ -2
SMC4-227ENST00000497984 TTC31Q49AM3 519 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms