RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 SIX3O95343 332 aaPredicted RBP4.3□□□□□ -1.72
TARDBP-210ENST00000496840 SUPT20HL2P0C7V6 817 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 PEX3P56589 373 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 KRTAP10-8P60410 259 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 RPS27AP62979 156 aaKnown RBP4.3□□□□□ -1.72
TARDBP-210ENST00000496840 NAAAQ02083 359 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 MPP7Q5T2T1 576 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 NEPROQ6NW34 567 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 NLRP14Q86W24 1093 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 METTL23Q86XA0 190 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 C4orf19Q8IY42 314 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 PARP8Q8N3A8 854 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 CLEC1AQ8NC01 280 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 BEST4Q8NFU0 473 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 OR6T1Q8NGN1 323 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 BPIFA2Q96DR5 249 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 SPATA17Q96L03 361 aa4.3□□□□□ -1.72
TARDBP-210ENST00000496840 UBE2TQ9NPD8 197 aaPredicted RBP4.3□□□□□ -1.72
TARDBP-210ENST00000496840 COL16A1Q07092 1604 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-210ENST00000496840 PFASO15067 1338 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 UMODL1Q5DID0 1318 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 TEX48A0A1B0GUV7 120 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 E2F3O00716 465 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 HAT1O14929 419 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 GRAP2O75791 330 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 CAPZA1P52907 286 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 BFSP1Q12934 665 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 ABRQ12979 859 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 CEACAM7Q14002 265 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 TIMM50Q3ZCQ8 353 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 ZNF776Q68DI1 518 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-210ENST00000496840 ANKRD46Q86W74 232 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 DZIP1Q86YF9 867 aaKnown RBP4.29□□□□□ -1.72
TARDBP-210ENST00000496840 OR8H3Q8N146 312 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 CARNMT1Q8N4J0 409 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 ZNF781Q8N8C0 355 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 MR1Q95460 341 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 GBP5Q96PP8 586 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 YTHDF1Q9BYJ9 559 aaKnown RBP4.29□□□□□ -1.72
TARDBP-210ENST00000496840 HBS1LQ9Y450 684 aaKnown RBP4.29□□□□□ -1.72
TARDBP-210ENST00000496840 KLF2Q9Y5W3 355 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-210ENST00000496840 POMT1Q9Y6A1 747 aa4.29□□□□□ -1.72
TARDBP-210ENST00000496840 TRAV34A0A0B4J273 112 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 ZNF253O75346 499 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 PRKCIP41743 596 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 LIPJQ5W064 366 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 REP15Q6BDI9 236 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 RFWD3Q6PCD5 774 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 PAMR1Q6UXH9 720 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 SPATA19Q7Z5L4 167 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 SLC34A3Q8N130 599 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 RNF149Q8NC42 400 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 ZNRF1Q8ND25 227 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 FLVCR1-AS1Q8TAF5 88 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 SETD6Q8TBK2 473 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 DEPDC1BQ8WUY9 529 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 CORO2AQ92828 525 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 FAM162AQ96A26 154 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 INTS14Q96SY0 518 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 SLC39A8Q9C0K1 460 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 LIME1Q9H400 295 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 S100A14Q9HCY8 104 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 DHRS4-AS1Q9P1J3 65 aa4.28□□□□□ -1.72
TARDBP-210ENST00000496840 ANKDD1BA6NHY2 528 aa4.27□□□□□ -1.73
TARDBP-210ENST00000496840 RTL8CO15255 209 aa4.27□□□□□ -1.73
TARDBP-210ENST00000496840 SRPX2O60687 465 aaPredicted RBP4.27□□□□□ -1.73
TARDBP-210ENST00000496840 CLN5O75503 358 aa4.27□□□□□ -1.73
TARDBP-210ENST00000496840 ZFYP08048 801 aaPredicted RBP4.27□□□□□ -1.73
TARDBP-210ENST00000496840 ACKR3P25106 362 aa4.27□□□□□ -1.73
TARDBP-210ENST00000496840 IGLV3-21P80748 117 aaPredicted RBP4.27□□□□□ -1.73
TARDBP-210ENST00000496840 MARC1Q5VT66 337 aa4.27□□□□□ -1.73
TARDBP-210ENST00000496840 SHQ1Q6PI26 577 aaKnown RBP4.27□□□□□ -1.73
TARDBP-210ENST00000496840 GOT1L1Q8NHS2 421 aaPredicted RBP4.27□□□□□ -1.73
TARDBP-210ENST00000496840 SAP25Q8TEE9 199 aa4.27□□□□□ -1.73
TARDBP-210ENST00000496840 ERO1AQ96HE7 468 aa4.27□□□□□ -1.73
TARDBP-210ENST00000496840 ZIM3Q96PE6 472 aa4.27□□□□□ -1.73
TARDBP-210ENST00000496840 MTIF3Q9H2K0 278 aaKnown RBP4.27□□□□□ -1.73
TARDBP-210ENST00000496840 ZWILCHQ9H900 591 aa4.27□□□□□ -1.73
TARDBP-210ENST00000496840 DNAJB9Q9UBS3 223 aa4.27□□□□□ -1.73
TARDBP-210ENST00000496840 ARHGEF37A1IGU5 675 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 ZNF724A8MTY0 619 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 SLC7A4O43246 635 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 SELENOFO60613 162 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 PDGFBP01127 241 aaPredicted RBP4.26□□□□□ -1.73
TARDBP-210ENST00000496840 GIG44P09565 113 aaPredicted RBP4.26□□□□□ -1.73
TARDBP-210ENST00000496840 UMPSP11172 480 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 NPBWR1P48145 328 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 KRT83P78385 493 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 PET117Q6UWS5 81 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 ZNF600Q6ZNG1 722 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 BADQ92934 168 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 SGF29Q96ES7 293 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 CITED2Q99967 270 aaPredicted RBP4.26□□□□□ -1.73
TARDBP-210ENST00000496840 ATG101Q9BSB4 218 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 THUMPD3Q9BV44 507 aaKnown RBP4.26□□□□□ -1.73
TARDBP-210ENST00000496840 MINDY3Q9H8M7 445 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 GRPEL1Q9HAV7 217 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 MED17Q9NVC6 651 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 SH3GLB1Q9Y371 365 aa4.26□□□□□ -1.73
TARDBP-210ENST00000496840 OR5H15A6NDH6 313 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 313.2 ms