RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 NOTCH2NLQ7Z3S9 236 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 TAF8Q7Z7C8 310 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 CACUL1Q86Y37 369 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 ZNF248Q8NDW4 579 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 OR4L1Q8NH43 312 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 OR2T6Q8NHC8 308 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 GPR137Q96N19 417 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 ASCL2Q99929 193 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 SPAG8Q99932 426 aaPredicted RBP4.66□□□□□ -1.66
SSR3-208ENST00000496050 AGPAT1Q99943 283 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 DPEP3Q9H4B8 488 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 SPHK2Q9NRA0 654 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 MED17Q9NVC6 651 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 NINJ2Q9NZG7 142 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 NDUFA13Q9P0J0 144 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 FAM153AQ9UHL3 310 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 BAIAP2L1Q9UHR4 511 aa4.66□□□□□ -1.66
SSR3-208ENST00000496050 GLTPD2A6NH11 291 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 SSX5O60225 188 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 CLDN1O95832 211 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 ANGPTL1O95841 491 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 TXNDC12O95881 172 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 MT-ATP6P00846 226 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 APRTP07741 180 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 ETS1P14921 441 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 ACP1P24666 158 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 EDNRAP25101 427 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 SFNP31947 248 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 RPL9P32969 192 aaKnown RBP4.65□□□□□ -1.67
SSR3-208ENST00000496050 ATXN3P54252 364 aaPredicted RBP4.65□□□□□ -1.67
SSR3-208ENST00000496050 GEMP55040 296 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 OR1C1Q15619 314 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 RFTN2Q52LD8 501 aaPredicted RBP4.65□□□□□ -1.67
SSR3-208ENST00000496050 HERC4Q5GLZ8 1057 aaPredicted RBP4.65□□□□□ -1.67
SSR3-208ENST00000496050 BSPRYQ5W0U4 402 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 HIST2H2AA3Q6FI13 130 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 FRRS1Q6ZNA5 592 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 Q6ZRP5 223 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 ANKRD20A12PQ8NF67 263 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 OR52E1Q8NGJ3 308 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 OR10G7Q8NGN6 311 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 GOLGA5Q8TBA6 731 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 U2AF1L4Q8WU68 220 aaKnown RBP4.65□□□□□ -1.67
SSR3-208ENST00000496050 TCP11Q8WWU5 503 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 RPGRIP1Q96KN7 1286 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 CXorf58Q96LI9 332 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 FAM111AQ96PZ2 611 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 SLC26A1Q9H2B4 701 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 FAM212BQ9NTI7 297 aaPredicted RBP4.65□□□□□ -1.67
SSR3-208ENST00000496050 NLGN3Q9NZ94 848 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 ERRFI1Q9UJM3 462 aaPredicted RBP4.65□□□□□ -1.67
SSR3-208ENST00000496050 MRTO4Q9UKD2 239 aaKnown RBP4.65□□□□□ -1.67
SSR3-208ENST00000496050 PIN4Q9Y237 131 aaKnown RBP4.65□□□□□ -1.67
SSR3-208ENST00000496050 EXOGQ9Y2C4 368 aaKnown RBP4.65□□□□□ -1.67
SSR3-208ENST00000496050 WIPI2Q9Y4P8 454 aa4.65□□□□□ -1.67
SSR3-208ENST00000496050 LOC105371242A0A075B767 164 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 A0A087X002 238 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 YJEFN3A6XGL0 299 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 SRRM4A7MD48 611 aaKnown RBP4.64□□□□□ -1.67
SSR3-208ENST00000496050 PRR23D1E9PI22 279 aaPredicted RBP4.64□□□□□ -1.67
SSR3-208ENST00000496050 TNFSF12O43508 249 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 KIAA0513O60268 411 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 B3GALNT1O75752 331 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 STAM2O75886 525 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 OR6A2O95222 327 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 HIST1H2AGP0C0S8 130 aaPredicted RBP4.64□□□□□ -1.67
SSR3-208ENST00000496050 TPBGLP0DKB5 382 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 PRR23D2P0DMB1 279 aaPredicted RBP4.64□□□□□ -1.67
SSR3-208ENST00000496050 PTMSP20962 102 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 PDHA2P29803 388 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 PITPNBP48739 271 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 NUMBP49757 651 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 FHITP49789 147 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 EVCP57679 992 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 ABCE1P61221 599 aaKnown RBP4.64□□□□□ -1.67
SSR3-208ENST00000496050 CDKL1Q00532 357 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 HSPA14Q0VDF9 509 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 GCKRQ14397 625 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 FAM189A2Q15884 450 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 KRTAP24-1Q3LI83 254 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 C1orf189Q5VU69 101 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 NKAIN2Q5VXU1 208 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 OR6B2Q6IFH4 312 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 CATSPERDQ86XM0 798 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.64□□□□□ -1.67
SSR3-208ENST00000496050 ELMOD2Q8IZ81 293 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 KDM8Q8N371 416 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 ADAD2Q8NCV1 583 aaKnown RBP4.64□□□□□ -1.67
SSR3-208ENST00000496050 OR9Q2Q8NGE9 314 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 OR6M1Q8NGM8 313 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 ZNF519Q8TB69 540 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 HIST1H2ACQ93077 130 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 ESAMQ96AP7 390 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 RAB39BQ96DA2 213 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 OVOL2Q9BRP0 275 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 ZNF577Q9BSK1 485 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 ATG10Q9H0Y0 220 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 HSD3B7Q9H2F3 369 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 KCNK13Q9HB14 408 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 GDF3Q9NR23 364 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms