RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 CYP1A2P05177 515 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 SLC25A16P16260 332 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 ALOX12P18054 663 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 PSMB4P28070 264 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 CDK9P50750 372 aaKnown RBP13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 SKP1P63208 163 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 EEF1A1P68104 462 aaKnown RBP13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 BMPR2Q13873 1038 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 POU6F1Q14863 301 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 EEF1A1P5Q5VTE0 462 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 CAPN13Q6MZZ7 669 aaPredicted RBP13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 CNEP1R1Q8N9A8 125 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 SMAP2Q8WU79 429 aaPredicted RBP13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 STYXQ8WUJ0 223 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 STARD4Q96DR4 205 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 ZNF597Q96LX8 424 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 SLC39A3Q9BRY0 314 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 DOHHQ9BU89 302 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 LMBRD1Q9NUN5 540 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 TMEM184CQ9NVA4 438 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 ELOVL5Q9NYP7 299 aa13.19□□□□□ -0.3
CHMP2B-205ENST00000494980 H0Y3Z8 333 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 GFYI3L273 518 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 SLC16A8O95907 504 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 HPNP05981 417 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 RNH1P13489 461 aaKnown RBP13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 NR2C2P49116 596 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 CR1LQ2VPA4 569 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 ZNF791Q3KP31 576 aaPredicted RBP13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 EIPR1Q53HC9 387 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 BZW1Q7L1Q6 419 aaKnown RBP13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 VSIG1Q86XK7 387 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 ZNF321PQ8N8H1 164 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 BANPQ8N9N5 519 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 LILRB1Q8NHL6 650 aaPredicted RBP13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 GABPB2Q8TAK5 448 aaPredicted RBP13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 RAB3IL1Q8TBN0 382 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 ZNF480Q8WV37 535 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 QKIQ96PU8 341 aaKnown RBP eCLIP13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 ALS2CR12Q96Q35 445 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 PKP4Q99569 1192 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 TTC1Q99614 292 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 KRTAP17-1Q9BYP8 105 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 KLHL4Q9C0H6 718 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 NAT10Q9H0A0 1025 aaKnown RBP13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 AIPL1Q9NZN9 384 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 CLCF1Q9UBD9 225 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 DTX4Q9Y2E6 619 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 AAR2Q9Y312 384 aaKnown RBP13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 MMACHCQ9Y4U1 282 aa13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 EPN1Q9Y6I3 576 aaPredicted RBP13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 EPPK1P58107 5090 aaKnown RBP13.18□□□□□ -0.3
CHMP2B-205ENST00000494980 A0A1W2PP18 115 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 ZNF839A8K0R7 811 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 E7ENX8 843 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 NDUFS4O43181 175 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 LCMT2O60294 686 aaKnown RBP13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 CEP104O60308 925 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 DLX3O60479 287 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 SERPINC1P01008 464 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 KRT1P04264 644 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 ZNF888P0CJ79 500 aaPredicted RBP13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 NAGLUP54802 743 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 RNF4P78317 190 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 TBL3Q12788 808 aaKnown RBP13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 TOMM20Q15388 145 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 PHKG1Q16816 387 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 ITPRIPL1Q6GPH6 555 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 LYPD8Q6UX82 237 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 APTXQ7Z2E3 356 aaKnown RBP13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 ADGRE4PQ86SQ3 457 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 WFDC8Q8IUA0 241 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 FAM13CQ8NE31 585 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 OR10G3Q8NGC4 313 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 MSI2Q96DH6 328 aaKnown RBP13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 PGM2Q96G03 612 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 GBP4Q96PP9 640 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 KRT12Q99456 494 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 UBQLN3Q9H347 655 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 OCEL1Q9H607 264 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 ARNT2Q9HBZ2 717 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 ADAP2Q9NPF8 381 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 FEZ2Q9UHY8 353 aaPredicted RBP13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 SH2B3Q9UQQ2 575 aa13.17□□□□□ -0.3
CHMP2B-205ENST00000494980 GOLGA6L22H0YM25 854 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 STK10O94804 968 aaKnown RBP13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 CHRM3P20309 590 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 USF1P22415 310 aaPredicted RBP13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 HSD17B2P37059 387 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 SRP14P37108 136 aaKnown RBP13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 CCR8P51685 355 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 DSCR9P59020 149 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 LSM11P83369 360 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 SRYQ05066 204 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 KLHL30Q0D2K2 578 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 ASPHQ12797 758 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 SEMA3AQ14563 771 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 NRF1Q16656 503 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 PTRHD1Q6GMV3 140 aaKnown RBP13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 ADAM5Q6NVV9 412 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms