RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 RNH1P13489 461 aaKnown RBP18.28■□□□□ 0.52
USP39-218ENST00000493829 PRPS1L1P21108 318 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 JAK1P23458 1154 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 RORAP35398 523 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 BUD31P41223 144 aaPredicted RBP18.28■□□□□ 0.52
USP39-218ENST00000493829 DGKQP52824 942 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 FOXL2P58012 376 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 ABHD18Q0P651 414 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 HEPACAMQ14CZ8 416 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 UGT8Q16880 541 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 FAM174BQ3ZCQ3 159 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 TIGD2Q4W5G0 525 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 LCN10Q6JVE6 187 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 COX15Q7KZN9 410 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 TRPM8Q7Z2W7 1104 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 POU5F2Q8N7G0 328 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 EXOSC8Q96B26 276 aaKnown RBP18.28■□□□□ 0.52
USP39-218ENST00000493829 REEP4Q9H6H4 257 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 CTSFQ9UBX1 484 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 MEN1O00255 615 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 PGRMC2O15173 223 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 B4GALT2O60909 372 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 FURINP09958 794 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 PIM1P11309 404 aaPredicted RBP18.28■□□□□ 0.52
USP39-218ENST00000493829 DDCP20711 480 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 EFNA1P20827 205 aaPredicted RBP18.28■□□□□ 0.52
USP39-218ENST00000493829 ZFP36L2P47974 494 aaKnown RBP18.28■□□□□ 0.52
USP39-218ENST00000493829 POLR2JP52435 117 aaKnown RBP18.28■□□□□ 0.52
USP39-218ENST00000493829 ID2Q02363 134 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 PRSS53Q2L4Q9 553 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 NKAIN1Q4KMZ8 207 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 ZNF385BQ569K4 471 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 SPANXN4Q5MJ08 99 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 MFSD4BQ5TF39 518 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 TMEM164Q5U3C3 297 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 FAM199XQ6PEV8 388 aaPredicted RBP18.28■□□□□ 0.52
USP39-218ENST00000493829 SNX32Q86XE0 403 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 FUNDC1Q8IVP5 155 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 RIMKLAQ8IXN7 391 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 FAM9CQ8IZT9 166 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 CACTIN-AS1Q8N1I8 211 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 MR1Q95460 341 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 PPCDCQ96CD2 204 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 CLMPQ9H6B4 373 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 AKIRIN1Q9H9L7 192 aaPredicted RBP18.28■□□□□ 0.52
USP39-218ENST00000493829 POLR1BQ9H9Y6 1135 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 SLC22A11Q9NSA0 550 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 SH3BP4Q9P0V3 963 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 MYOCOSA0A1B0GUC4 107 aa18.27■□□□□ 0.52
USP39-218ENST00000493829 OR2W5A6NFC9 320 aa18.27■□□□□ 0.52
USP39-218ENST00000493829 CLNS1AP54105 237 aaKnown RBP18.27■□□□□ 0.52
USP39-218ENST00000493829 KCNK10P57789 538 aa18.27■□□□□ 0.52
USP39-218ENST00000493829 DCDP81605 110 aaKnown RBP18.27■□□□□ 0.52
USP39-218ENST00000493829 ZNF385CQ66K41 422 aaPredicted RBP18.27■□□□□ 0.52
USP39-218ENST00000493829 SHISA6Q6ZSJ9 500 aa18.27■□□□□ 0.52
USP39-218ENST00000493829 VPS33AQ96AX1 596 aa18.27■□□□□ 0.52
USP39-218ENST00000493829 KLHL29Q96CT2 875 aa18.27■□□□□ 0.52
USP39-218ENST00000493829 ZPBPQ9BS86 351 aa18.27■□□□□ 0.52
USP39-218ENST00000493829 WDR41Q9HAD4 459 aa18.27■□□□□ 0.52
USP39-218ENST00000493829 MAP4K5Q9Y4K4 846 aa18.27■□□□□ 0.52
USP39-218ENST00000493829 PCDHA9Q9Y5H5 950 aa18.27■□□□□ 0.52
USP39-218ENST00000493829 SCN2AQ99250 2005 aa18.27■□□□□ 0.51
USP39-218ENST00000493829 LOC100653049A0A140TA62 436 aa18.26■□□□□ 0.51
USP39-218ENST00000493829 FAM234BA2RU67 622 aa18.26■□□□□ 0.51
USP39-218ENST00000493829 GABRR3A8MPY1 467 aa18.26■□□□□ 0.51
USP39-218ENST00000493829 CYR61O00622 381 aa18.26■□□□□ 0.51
USP39-218ENST00000493829 ERAL1O75616 437 aaKnown RBP18.26■□□□□ 0.51
USP39-218ENST00000493829 KRT34O76011 436 aa18.26■□□□□ 0.51
USP39-218ENST00000493829 LAMP1P11279 417 aa18.26■□□□□ 0.51
USP39-218ENST00000493829 SPINK2P20155 84 aa18.26■□□□□ 0.51
USP39-218ENST00000493829 CAPN3P20807 821 aa18.26■□□□□ 0.51
USP39-218ENST00000493829 TLX1P31314 330 aaPredicted RBP18.26■□□□□ 0.51
USP39-218ENST00000493829 GSTM5P46439 218 aa18.26■□□□□ 0.51
USP39-218ENST00000493829 MRPL19P49406 292 aaKnown RBP18.26■□□□□ 0.51
USP39-218ENST00000493829 ACTN3Q08043 901 aaPredicted RBP18.26■□□□□ 0.51
USP39-218ENST00000493829 VWA2Q5GFL6 755 aa18.26■□□□□ 0.51
USP39-218ENST00000493829 OR4N5Q8IXE1 308 aa18.26■□□□□ 0.51
USP39-218ENST00000493829 CIDECQ96AQ7 238 aaPredicted RBP18.26■□□□□ 0.51
USP39-218ENST00000493829 RPF2Q9H7B2 306 aaKnown RBP18.26■□□□□ 0.51
USP39-218ENST00000493829 MS4A12Q9NXJ0 267 aa18.26■□□□□ 0.51
USP39-218ENST00000493829 IFT80Q9P2H3 777 aaPredicted RBP18.26■□□□□ 0.51
USP39-218ENST00000493829 PCDHGA3Q9Y5H0 932 aa18.26■□□□□ 0.51
USP39-218ENST00000493829 A0A1W2PS29 197 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 C1orf226A1L170 272 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 CAPN14A8MX76 684 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 PRMT3O60678 531 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 LDB3O75112 727 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 FHP07954 510 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 C8orf89P0DMQ9 161 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 AGXTP21549 392 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 PLIN5Q00G26 463 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 PDE7AQ13946 482 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 RCAN2Q14206 197 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 ZNF750Q32MQ0 723 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 MINDY4Q4G0A6 757 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 VPS26BQ4G0F5 336 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 CPTPQ5TA50 214 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 MLIPQ5VWP3 458 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 OR4F3Q6IEY1 312 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 OR52E8Q6IFG1 317 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms