RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 B4GALT2O60909 372 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 ALOX12BO75342 701 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 SCELO95171 688 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 HSPA4LO95757 839 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 RECKO95980 971 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 SERPINE1P05121 402 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 UROSP10746 265 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 HSD3B1P14060 373 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 ACPPP15309 386 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 BGNP21810 368 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 IL10P22301 178 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 HIST1H1TP22492 207 aaPredicted RBP10.91□□□□□ -0.66
CTSA-209ENST00000493522 MMP11P24347 488 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 HSD3B2P26439 372 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 SERPINB3P29508 390 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 SERPINB5P36952 375 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 EEF1A2Q05639 463 aaKnown RBP10.91□□□□□ -0.66
CTSA-209ENST00000493522 RUNX2Q13950 521 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 IMPG1Q17R60 797 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 ARL13AQ5H913 290 aaPredicted RBP10.91□□□□□ -0.66
CTSA-209ENST00000493522 OR4C11Q6IEV9 310 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 CYP20A1Q6UW02 462 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 SCIMPQ6UWF3 145 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 LAPTM4BQ86VI4 370 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 ACOT4Q8N9L9 421 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 METTL21AQ8WXB1 218 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 THAP4Q8WY91 577 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 IP6K3Q96PC2 410 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 CSF3RQ99062 836 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 MRPL1Q9BYD6 325 aaKnown RBP10.91□□□□□ -0.66
CTSA-209ENST00000493522 VN1R1Q9GZP7 353 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 TNFRSF12AQ9NP84 129 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 NMRK1Q9NWW6 199 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 PSD3Q9NYI0 1048 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 AHSPQ9NZD4 102 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 FBXW2Q9UKT8 454 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 MRPS33Q9Y291 106 aaKnown RBP10.91□□□□□ -0.66
CTSA-209ENST00000493522 HS3ST3B1Q9Y662 390 aa10.91□□□□□ -0.66
CTSA-209ENST00000493522 PRRC2CQ9Y520 2896 aaKnown RBP10.91□□□□□ -0.66
CTSA-209ENST00000493522 ARHGAP10A1A4S6 786 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 TMEM114B3SHH9 223 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 TMEM233B4DJY2 109 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 K7EM74 188 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 EEDO75530 441 aaKnown RBP10.9□□□□□ -0.66
CTSA-209ENST00000493522 LYPLA1O75608 230 aaPredicted RBP10.9□□□□□ -0.66
CTSA-209ENST00000493522 AGFG2O95081 481 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 CHEK2O96017 543 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 C8orf89P0DMQ9 161 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 CHN1P15882 459 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 CPN2P22792 545 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 BSGP35613 385 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 TSFMP43897 325 aaKnown RBP10.9□□□□□ -0.66
CTSA-209ENST00000493522 EFNA3P52797 238 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 ARFIP1P53367 373 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 SLC18A1P54219 525 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 LIM2P55344 173 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 WDR4P57081 412 aaKnown RBP10.9□□□□□ -0.66
CTSA-209ENST00000493522 HMGCS1Q01581 520 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 CHAF1BQ13112 559 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 ABRAXAS2Q15018 415 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 TUBB8Q3ZCM7 444 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 SH2D4BQ5SQS7 431 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 KANK2Q63ZY3 851 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 CPZQ66K79 652 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 LANCL3Q6ZV70 420 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 PAGE2Q7Z2X7 111 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 ZCCHC7Q8N3Z6 543 aaKnown RBP10.9□□□□□ -0.66
CTSA-209ENST00000493522 GBP7Q8N8V2 638 aaPredicted RBP10.9□□□□□ -0.66
CTSA-209ENST00000493522 TSLPQ969D9 159 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 C8orf44Q96CB5 159 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 VPS50Q96JG6 964 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 MAPKAP1Q9BPZ7 522 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 ZNF717Q9BY31 904 aaPredicted RBP10.9□□□□□ -0.66
CTSA-209ENST00000493522 ACPTQ9BZG2 426 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 LYRM4Q9HD34 91 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 PRTFDC1Q9NRG1 225 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 LANCL2Q9NS86 450 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 ZNF446Q9NWS9 450 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 LYARQ9NX58 379 aaKnown RBP10.9□□□□□ -0.66
CTSA-209ENST00000493522 P4HTMQ9NXG6 502 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 C19orf25Q9UFG5 118 aaPredicted RBP10.9□□□□□ -0.66
CTSA-209ENST00000493522 PHF11Q9UIL8 331 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 DAPP1Q9UN19 280 aa10.9□□□□□ -0.66
CTSA-209ENST00000493522 A0A0A6YYD5 115 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 OR2W5A6NFC9 320 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 TTLL8A6PVC2 850 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 FAM227AF5H4B4 570 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 SOCS6O14544 535 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 SKAP2O75563 359 aaPredicted RBP10.89□□□□□ -0.67
CTSA-209ENST00000493522 GBAP04062 536 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 CYC1P08574 325 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 GRK2P25098 689 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 ARRB2P32121 409 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 RRADP55042 308 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 HNRNPH2P55795 449 aaKnown RBP10.89□□□□□ -0.67
CTSA-209ENST00000493522 RHAGQ02094 409 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 TNFRSF17Q02223 184 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 BTKQ06187 659 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 ZNF33BQ06732 778 aa10.89□□□□□ -0.67
CTSA-209ENST00000493522 GALNT1Q10472 559 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms