RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 RGMAQ96B86 450 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 SCYL1Q96KG9 808 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 MAPKAP1Q9BPZ7 522 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 TRIM45Q9H8W5 580 aaPredicted RBP25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 DMRT3Q9NQL9 472 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 KLHL1Q9NR64 748 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 PLEKHB1Q9UF11 243 aaPredicted RBP25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 TRBV11-1A0A0K0K1C0 115 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 EXOC1LA0A1B0GW35 172 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 TRIM49D1C9J1S8 452 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 SAP18O00422 153 aaKnown RBP25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 IFNA16P05015 189 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 SP1P08047 785 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 STSP08842 583 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 SNRPAP09012 282 aaKnown RBP25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 PTX3P26022 381 aaPredicted RBP25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 PPP2R1BP30154 601 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 TRHRP34981 398 aaPredicted RBP25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 ST13P50502 369 aaKnown RBP25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 RAP1GDS1P52306 607 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 SERTAD2Q14140 314 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 SLC25A25Q6KCM7 469 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 GFRALQ6UXV0 394 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 TRMT10CQ7L0Y3 403 aaKnown RBP25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 DAZLQ92904 295 aaKnown RBP25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 PHF21BQ96EK2 531 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 MTERF1Q99551 399 aaKnown RBP25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 CCDC77Q9BR77 488 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 ALOXE3Q9BYJ1 711 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 MS4A12Q9NXJ0 267 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 XPR1Q9UBH6 696 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 VTI1BQ9UEU0 232 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 CLCA3PQ9Y6N3 262 aa25.3■■□□□ 1.64
SH3GL3-204ENST00000492099 CYSRT1A8MQ03 144 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 STX16-NPEPL1H3BU86 382 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 STX16O14662 325 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 SMIM24O75264 130 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 CPN2P22792 545 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 MST1P26927 711 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 GPR143P51810 404 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 CPSF6Q16630 551 aaKnown RBP eCLIP25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 FAM98AQ8NCA5 519 aaKnown RBP25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 NCLNQ969V3 563 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 ATP6V1E2Q96A05 226 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 MRPL57Q9BQC6 102 aaKnown RBP25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 HES7Q9BYE0 225 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 PSD3Q9NYI0 1048 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 SEC14L3Q9UDX4 400 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 FBXW2Q9UKT8 454 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 ICE1Q9Y2F5 2266 aa25.29■■□□□ 1.64
SH3GL3-204ENST00000492099 LRRTM2O43300 516 aa25.28■■□□□ 1.64
SH3GL3-204ENST00000492099 SLC25A12O75746 678 aa25.28■■□□□ 1.64
SH3GL3-204ENST00000492099 CLDN9O95484 217 aa25.28■■□□□ 1.64
SH3GL3-204ENST00000492099 HLCSP50747 726 aa25.28■■□□□ 1.64
SH3GL3-204ENST00000492099 PER3P56645 1201 aa25.28■■□□□ 1.64
SH3GL3-204ENST00000492099 KCNK10P57789 538 aa25.28■■□□□ 1.64
SH3GL3-204ENST00000492099 PMP22Q01453 160 aa25.28■■□□□ 1.64
SH3GL3-204ENST00000492099 SLAMF1Q13291 335 aa25.28■■□□□ 1.64
SH3GL3-204ENST00000492099 ZNF468Q5VIY5 522 aaPredicted RBP25.28■■□□□ 1.64
SH3GL3-204ENST00000492099 RNF175Q8N4F7 328 aa25.28■■□□□ 1.64
SH3GL3-204ENST00000492099 MRPL46Q9H2W6 279 aaKnown RBP25.28■■□□□ 1.64
SH3GL3-204ENST00000492099 NOL11Q9H8H0 719 aaKnown RBP25.28■■□□□ 1.64
SH3GL3-204ENST00000492099 RNF11Q9Y3C5 154 aa25.28■■□□□ 1.64
SH3GL3-204ENST00000492099 ZGRF1Q86YA3 2104 aa25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 A0A1B0GUH1 482 aa25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 ASPDHA6ND91 283 aa25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 FOXE1O00358 373 aaPredicted RBP25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 PLPP1O14494 284 aa25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 ZFAND5O76080 213 aa25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 MLYCDO95822 493 aa25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 RPS13P62277 151 aaKnown RBP25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 CUL3Q13618 768 aa25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 MAPKAPK3Q16644 382 aa25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 GALNTL5Q7Z4T8 443 aa25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 ZCCHC7Q8N3Z6 543 aaKnown RBP25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 MORN4Q8NDC4 146 aa25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 OR14A16Q8NHC5 309 aa25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 THAP3Q8WTV1 239 aaPredicted RBP25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 TMEM125Q96AQ2 219 aa25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 MTBPQ96DY7 904 aa25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 ZNF223Q9UK11 482 aaPredicted RBP25.27■■□□□ 1.64
SH3GL3-204ENST00000492099 DOPEY1Q5JWR5 2465 aa25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 LDB3O75112 727 aa25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 UNC5CO95185 931 aa25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 RHOXF2BP0C7M4 288 aa25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 TLX1P31314 330 aaPredicted RBP25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 ARL1P40616 181 aaPredicted RBP25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 CCNG1P51959 295 aa25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 BIKQ13323 160 aa25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 ZRSR2Q15696 482 aaKnown RBP25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 TIFABQ6ZNK6 161 aa25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 WDR20Q8TBZ3 569 aa25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 PTPMT1Q8WUK0 201 aaPredicted RBP25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 RHOXF2Q9BQY4 288 aa25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 NTMT1Q9BV86 223 aa25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 SORBS1Q9BX66 1292 aaKnown RBP25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 PHF11Q9UIL8 331 aa25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 PCTPQ9UKL6 214 aa25.26■■□□□ 1.63
SH3GL3-204ENST00000492099 OR7A17O14581 309 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms