RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 GK5Q6ZS86 529 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 CAMKMTQ7Z624 323 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 THOC6Q86W42 341 aaKnown RBP12.21□□□□□ -0.45
USF1-206ENST00000491629 PALM2Q8IXS6 379 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 LMNTD2Q8IXW0 634 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.21□□□□□ -0.45
USF1-206ENST00000491629 TNIP2Q8NFZ5 429 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 MS4A6EQ96DS6 147 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 C18orf12Q96KH6 178 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 PLEKHF2Q9H8W4 249 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 ALKBH4Q9NXW9 302 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 TAS2R13Q9NYV9 303 aa12.21□□□□□ -0.45
USF1-206ENST00000491629 CUBNO60494 3623 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 LRIT2A6NDA9 550 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 URADA6NGE7 173 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 KRT14P02533 472 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 RAF1P04049 648 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 INHBBP09529 407 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 HIST1H2AGP0C0S8 130 aaPredicted RBP12.2□□□□□ -0.46
USF1-206ENST00000491629 HIST1H2ADP20671 130 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 CEACAM8P31997 349 aaPredicted RBP12.2□□□□□ -0.46
USF1-206ENST00000491629 RNF4P78317 190 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 SARNPP82979 210 aaKnown RBP12.2□□□□□ -0.46
USF1-206ENST00000491629 CCZ1BP86790 482 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 CCZ1P86791 482 aaPredicted RBP12.2□□□□□ -0.46
USF1-206ENST00000491629 SLC13A2Q13183 592 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 ELAVL1Q15717 326 aaKnown RBP12.2□□□□□ -0.46
USF1-206ENST00000491629 FBXL19-AS1Q494R0 122 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 ADNP2Q6IQ32 1131 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 LYPD8Q6UX82 237 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 HSDL2Q6YN16 418 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 FAM47EQ6ZV65 393 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 VN1R5Q7Z5H4 357 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 TMPRSS11BQ86T26 416 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 ULK2Q8IYT8 1036 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 TBC1D19Q8N5T2 526 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 GOLM1Q8NBJ4 401 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 GOT1L1Q8NHS2 421 aaPredicted RBP12.2□□□□□ -0.46
USF1-206ENST00000491629 CALML6Q8TD86 181 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 FAM222BQ8WU58 562 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 GAL3ST3Q96A11 431 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 SARAFQ96BY9 339 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 HIST1H2AHQ96KK5 128 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 CAPZA3Q96KX2 299 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 HIST1H2AJQ99878 128 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 H2AFJQ9BTM1 129 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 PLAC1Q9HBJ0 212 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 XAB2Q9HCS7 855 aaKnown RBP12.2□□□□□ -0.46
USF1-206ENST00000491629 SLC22A14Q9Y267 594 aa12.2□□□□□ -0.46
USF1-206ENST00000491629 TRGV5A0A0B4J1U4 118 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 LRRC3CA6NJW4 275 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 CLDN4O14493 209 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 ERI3O43414 337 aaKnown RBP12.19□□□□□ -0.46
USF1-206ENST00000491629 NRDCO43847 1150 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 HCN1O60741 890 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 PRAMEF4O60810 478 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 BANF1O75531 89 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 ETHE1O95571 254 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 BMP5P22003 454 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 TACR1P25103 407 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 LIM2P55344 173 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 CRYMQ14894 314 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 C18orf21Q32NC0 220 aaPredicted RBP12.19□□□□□ -0.46
USF1-206ENST00000491629 ADPRMQ3LIE5 342 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 WLSQ5T9L3 541 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 PRAMEF9Q5VWM5 478 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 CHSY3Q70JA7 882 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 ZNF595Q8IYB9 648 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 KLHDC8AQ8IYD2 350 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 NAT8LQ8N9F0 302 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 RNASE6Q93091 150 aaKnown RBP12.19□□□□□ -0.46
USF1-206ENST00000491629 AIF1LQ9BQI0 150 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 FAM167BQ9BTA0 163 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 NPLQ9BXD5 320 aaPredicted RBP12.19□□□□□ -0.46
USF1-206ENST00000491629 OR8D2Q9GZM6 311 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 SLC6A15Q9H2J7 730 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 ZNF703Q9H7S9 590 aaPredicted RBP12.19□□□□□ -0.46
USF1-206ENST00000491629 SACM1LQ9NTJ5 587 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 B4GALT7Q9UBV7 327 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 VTI1BQ9UEU0 232 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 MAD1L1Q9Y6D9 718 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 DSCAMO60469 2012 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 HIVEP2P31629 2446 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 ROS1P08922 2347 aa12.19□□□□□ -0.46
USF1-206ENST00000491629 SONP18583 2426 aaKnown RBP12.18□□□□□ -0.46
USF1-206ENST00000491629 RAI1Q7Z5J4 1906 aaPredicted RBP12.18□□□□□ -0.46
USF1-206ENST00000491629 CDC7O00311 574 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 CTNSO60931 367 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 CCDC175P0C221 793 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 CD53P19397 219 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 SAT1P21673 171 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 CERS1P27544 350 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 CXCR5P32302 372 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 ASCL1P50553 236 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 ZNF136P52737 540 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 IL2P60568 153 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 BMPR2Q13873 1038 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 ZNF791Q3KP31 576 aaPredicted RBP12.18□□□□□ -0.46
USF1-206ENST00000491629 CLEC9AQ6UXN8 241 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 SLCO4C1Q6ZQN7 724 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms