RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 NDUFS4O43181 175 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 CEP104O60308 925 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 CST8O60676 142 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 C1QAP02745 245 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 CATP04040 527 aaKnown RBP10.5□□□□□ -0.73
HDAC6-233ENST00000489352 IGHV4-31P0DP07 118 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 PECAM1P16284 738 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-233ENST00000489352 CTNNA2P26232 953 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 SRP14P37108 136 aaKnown RBP10.5□□□□□ -0.73
HDAC6-233ENST00000489352 SLCO1A2P46721 670 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 COMPP49747 757 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-233ENST00000489352 GZMKP49863 264 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 SRYQ05066 204 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 NRF1Q16656 503 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 DENND5AQ6IQ26 1287 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 AFTPHQ6ULP2 937 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 P4HA3Q7Z4N8 544 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 TC2NQ8N9U0 490 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 OR4L1Q8NH43 312 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 SMAP2Q8WU79 429 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-233ENST00000489352 ZFAND2BQ8WV99 257 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 PKP4Q99569 1192 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 GORASP1Q9BQQ3 440 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 OCEL1Q9H607 264 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 CLK4Q9HAZ1 481 aaKnown RBP10.5□□□□□ -0.73
HDAC6-233ENST00000489352 ARMCX1Q9P291 453 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 GDF2Q9UK05 429 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-233ENST00000489352 R3HDM2Q9Y2K5 976 aaKnown RBP10.5□□□□□ -0.73
HDAC6-233ENST00000489352 WNK1Q9H4A3 2382 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 A0A1W2PNV4 684 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 H7C0C1 242 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 GFYI3L273 518 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 MYO1CO00159 1063 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 PRMT5O14744 637 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-233ENST00000489352 NDUFS7O75251 213 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 SLC16A8O95907 504 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 B3GALT4O96024 378 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 GOT2P00505 430 aaKnown RBP10.49□□□□□ -0.73
HDAC6-233ENST00000489352 FESP07332 822 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 ZNF888P0CJ79 500 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-233ENST00000489352 TNNT1P13805 278 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 SLC25A16P16260 332 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 TNNI3P19429 210 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 TBXA2RP21731 343 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 COILP38432 576 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-233ENST00000489352 ATP5OP48047 213 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 RNF4P78317 190 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 RGS1Q08116 209 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 NHSL2Q5HYW2 709 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.49□□□□□ -0.73
HDAC6-233ENST00000489352 AARS2Q5JTZ9 985 aaKnown RBP10.49□□□□□ -0.73
HDAC6-233ENST00000489352 CDKAL1Q5VV42 579 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 GRAMD2AQ8IUY3 354 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 AFAP1L2Q8N4X5 818 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 LRRC17Q8N6Y2 441 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 PAQR8Q8TEZ7 354 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 ZNF480Q8WV37 535 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 HAUS1Q96CS2 278 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 RUNDC3BQ96NL0 473 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 QKIQ96PU8 341 aaKnown RBP eCLIP10.49□□□□□ -0.73
HDAC6-233ENST00000489352 TUBA1CQ9BQE3 449 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 ANP32EQ9BTT0 268 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 OR8D2Q9GZM6 311 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 DNAJC11Q9NVH1 559 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 COPS7AQ9UBW8 275 aa10.49□□□□□ -0.73
HDAC6-233ENST00000489352 MAGED1Q9Y5V3 778 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-233ENST00000489352 UQCRHLA0A096LP55 91 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 SYNDIG1LA6NDD5 238 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 URADA6NGE7 173 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 FRG2CA6NGY1 282 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 KLF4O43474 513 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 LCMT2O60294 686 aaKnown RBP10.48□□□□□ -0.73
HDAC6-233ENST00000489352 OR10H2O60403 315 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 GAS8O95995 478 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 ACTL6AO96019 429 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 HPNP05981 417 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 SOD3P08294 240 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 PPP3CBP16298 524 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 CHMP24386 653 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 RBL1P28749 1068 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 PPP2R1BP30154 601 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 MASP1P48740 699 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 CDK9P50750 372 aaKnown RBP10.48□□□□□ -0.73
HDAC6-233ENST00000489352 LSM11P83369 360 aaKnown RBP eCLIP10.48□□□□□ -0.73
HDAC6-233ENST00000489352 ASPHQ12797 758 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 ELAVL1Q15717 326 aaKnown RBP10.48□□□□□ -0.73
HDAC6-233ENST00000489352 BBS9Q3SYG4 887 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 C17orf64Q86WR6 236 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 DND1Q8IYX4 353 aaKnown RBP10.48□□□□□ -0.73
HDAC6-233ENST00000489352 TBC1D19Q8N5T2 526 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 MORN4Q8NDC4 146 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 MCUQ8NE86 351 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 OR8K3Q8NH51 312 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 NTMT1Q9BV86 223 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 OPN3Q9H1Y3 402 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-233ENST00000489352 EML4Q9HC35 981 aaKnown RBP10.48□□□□□ -0.73
HDAC6-233ENST00000489352 EIF2B3Q9NR50 452 aaKnown RBP10.48□□□□□ -0.73
HDAC6-233ENST00000489352 PRTFDC1Q9NRG1 225 aa10.48□□□□□ -0.73
HDAC6-233ENST00000489352 DDX56Q9NY93 547 aaKnown RBP10.48□□□□□ -0.73
HDAC6-233ENST00000489352 UVRAGQ9P2Y5 699 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms