RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 CCDC91Q7Z6B0 441 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 OR4N5Q8IXE1 308 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 LGI4Q8N135 537 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 ADAMTS18Q8TE60 1221 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 UBE2E3Q969T4 207 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 CMTM7Q96FZ5 175 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 NSUN5Q96P11 429 aaKnown RBP13.07□□□□□ -0.32
VTI1A-206ENST00000489142 TBCDQ9BTW9 1192 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 FUT8Q9BYC5 575 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 ALOXE3Q9BYJ1 711 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 IPPKQ9H8X2 491 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 LYRM4Q9HD34 91 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 ADAP2Q9NPF8 381 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 DMRT3Q9NQL9 472 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 XPR1Q9UBH6 696 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 RNF11Q9Y3C5 154 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 EML6Q6ZMW3 1958 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 TRGV8A0A0C4DH27 118 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 NPIPA5E9PKD4 350 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 PLPP1O14494 284 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 FCHO1O14526 889 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 CTNSO60931 367 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 STSP08842 583 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 RHOXF2BP0C7M4 288 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 CPN2P22792 545 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 RFC3P40938 356 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 CYB561P49447 251 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 GPR143P51810 404 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 ALDH6A1Q02252 535 aaKnown RBP13.06□□□□□ -0.32
VTI1A-206ENST00000489142 STX4Q12846 297 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 PCBP2Q15366 365 aaKnown RBP eCLIP13.06□□□□□ -0.324e-7■■■■■ 39.6
VTI1A-206ENST00000489142 TMEM35AQ53FP2 167 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 GLE1Q53GS7 698 aaKnown RBP13.06□□□□□ -0.32
VTI1A-206ENST00000489142 C18orf63Q68DL7 685 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 ZNF787Q6DD87 383 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 SLC25A25Q6KCM7 469 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 CHSY3Q70JA7 882 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 CPSF7Q8N684 471 aaKnown RBP13.06□□□□□ -0.32
VTI1A-206ENST00000489142 TMEM178AQ8NBL3 297 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 LRRN4CLQ8ND94 238 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 SRFBP1Q8NEF9 429 aaKnown RBP13.06□□□□□ -0.32
VTI1A-206ENST00000489142 OR52B6Q8NGF0 335 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 DNAJB8Q8NHS0 232 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 DOK4Q8TEW6 326 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 MTFMTQ96DP5 389 aaKnown RBP13.06□□□□□ -0.32
VTI1A-206ENST00000489142 VMP1Q96GC9 406 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 FRMD6Q96NE9 622 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 RHOXF2Q9BQY4 288 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 NOL11Q9H8H0 719 aaKnown RBP13.06□□□□□ -0.32
VTI1A-206ENST00000489142 NPIPA1Q9UND3 350 aa13.06□□□□□ -0.32
VTI1A-206ENST00000489142 A0A087WUV0 522 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-206ENST00000489142 C17orf105B2RV13 164 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 OR7A17O14581 309 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 FGF17O60258 216 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 NME2P1O60361 137 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 EEDO75530 441 aaKnown RBP13.05□□□□□ -0.32
VTI1A-206ENST00000489142 ITGA10O75578 1167 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 ETHE1O95571 254 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 TNNI3P19429 210 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 NME2P22392 152 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 SERPINB9P50453 376 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 HLCSP50747 726 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 HNRNPH2P55795 449 aaKnown RBP13.05□□□□□ -0.32
VTI1A-206ENST00000489142 HSF1Q00613 529 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 PCDH1Q08174 1060 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 SLAMF1Q13291 335 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 RCN2Q14257 317 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 TERF2Q15554 542 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 ELAVL1Q15717 326 aaKnown RBP13.05□□□□□ -0.32
VTI1A-206ENST00000489142 RNFT1Q5M7Z0 435 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 DEPDC1Q5TB30 811 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 LIPJQ5W064 366 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 OR4C11Q6IEV9 310 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 TAOK1Q7L7X3 1001 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 GSPT2Q8IYD1 628 aaKnown RBP13.05□□□□□ -0.32
VTI1A-206ENST00000489142 HORMAD2Q8N7B1 307 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 KIF18AQ8NI77 898 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 PTPMT1Q8WUK0 201 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-206ENST00000489142 ISL2Q96A47 359 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 RGMAQ96B86 450 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 ANKRD9Q96BM1 317 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-206ENST00000489142 OR8D2Q9GZM6 311 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 ROGDIQ9GZN7 287 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 TSPYL1Q9H0U9 437 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 PCDHGB6Q9Y5F9 930 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 CLCA3PQ9Y6N3 262 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 CRYBG3Q68DQ2 2970 aa13.05□□□□□ -0.32
VTI1A-206ENST00000489142 EXOC1LA0A1B0GW35 172 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 ARHGAP10A1A4S6 786 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 ASPDHA6ND91 283 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 TMEM200CA6NKL6 621 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 WASHC1A8K0Z3 465 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 KIF2AO00139 706 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-206ENST00000489142 WWP2O00308 870 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 OR2J2O76002 312 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 KRT38O76015 456 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 SCELO95171 688 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 GBAP04062 536 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 FAM153BP0C7A2 387 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 TSPAN8P19075 237 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms