RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 UBTD2Q8WUN7 234 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.68□□□□□ -1.98
CD46-215ENST00000488596 LIPHQ8WWY8 451 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 SPATA13Q96N96 652 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 GUCD1Q96NT3 240 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 DCTN5Q9BTE1 182 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 LRRC61Q9BV99 259 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 ACAT2Q9BWD1 397 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 LRRC2Q9BYS8 371 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 TRIM15Q9C019 465 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 ZDHHC6Q9H6R6 413 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 VIPAS39Q9H9C1 493 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 UBE2TQ9NPD8 197 aaPredicted RBP2.68□□□□□ -1.98
CD46-215ENST00000488596 MUTYHQ9UIF7 546 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 EXOC7Q9UPT5 735 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 RNF215Q9Y6U7 377 aa2.68□□□□□ -1.98
CD46-215ENST00000488596 A0A0J9YWU9 116 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 IQCMA0A1B0GVH7 501 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 SH3PXD2BA1X283 911 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 ASB14A6NK59 587 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 SHISA7A6NL88 538 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 A8MXK9 166 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 EPM2AB3EWF7 344 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 VEGFDO43915 354 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 CSO75390 466 aaKnown RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 POP4O95707 220 aaKnown RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 FGF19O95750 216 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 GSTA2P09210 222 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 TRIM49P0CI25 452 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 TRIM49CP0CI26 452 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 UGT1A6P19224 532 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 ZNF10P21506 573 aaPredicted RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 GPX3P22352 226 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 NDUFV3P56181 108 aaKnown RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 PEX3P56589 373 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 ABCE1P61221 599 aaKnown RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 LMO4P61968 165 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 GALK2Q01415 458 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 GFPT1Q06210 699 aaPredicted RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 GABPAQ06546 454 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 RBBP4Q09028 425 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 ELAVL2Q12926 359 aaKnown RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 ITPK1Q13572 414 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 KIAA0141Q14154 515 aaPredicted RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 GCKRQ14397 625 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 ZNF146Q15072 292 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 MLF2Q15773 248 aaPredicted RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 STXBP2Q15833 593 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 KNOP1Q1ED39 458 aaKnown RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 WSCD2Q2TBF2 565 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 NEPROQ6NW34 567 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 ZNF343Q6P1L6 599 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 TOM1L2Q6ZVM7 507 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 CYP4V2Q6ZWL3 525 aaPredicted RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 WDR49Q8IV35 697 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 STHQ8IWL8 128 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 OR4N5Q8IXE1 308 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 ZNF440Q8IYI8 595 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 OR4L1Q8NH43 312 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 MIPOL1Q8TD10 442 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 GANCQ8TET4 914 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 SSC4DQ8WTU2 575 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 CHPT1Q8WUD6 406 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 ZNF689Q96CS4 500 aaPredicted RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 PCED1BQ96HM7 432 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 CXorf58Q96LI9 332 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 ALKBH3Q96Q83 286 aaPredicted RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 PRAM1Q96QH2 718 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 TNFRSF13CQ96RJ3 184 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 LGMNQ99538 433 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 SSX3Q99909 188 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 CXXC4Q9H2H0 198 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 PARLQ9H300 379 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 WDR41Q9HAD4 459 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 GPN1Q9HCN4 374 aaPredicted RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 S100A14Q9HCY8 104 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 ZCCHC3Q9NUD5 404 aaKnown RBP2.67□□□□□ -1.98
CD46-215ENST00000488596 MED17Q9NVC6 651 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 MIS18AQ9NYP9 233 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 MAD2L2Q9UI95 211 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 ERVK-19Q9WJR5 959 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 KCNK6Q9Y257 313 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 PRSS21Q9Y6M0 314 aa2.67□□□□□ -1.98
CD46-215ENST00000488596 IGHV4-30-2A0A087WSY4 118 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 OR5H15A6NDH6 313 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 ARHGEF33A8MVX0 844 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 OXTRP30559 389 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 PKLRP30613 574 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 FHITP49789 147 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 TNFSF10P50591 281 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 YBEYP58557 167 aaPredicted RBP2.66□□□□□ -1.98
CD46-215ENST00000488596 RPS27AP62979 156 aaKnown RBP2.66□□□□□ -1.98
CD46-215ENST00000488596 FKBP3Q00688 224 aaKnown RBP2.66□□□□□ -1.98
CD46-215ENST00000488596 UBXN1Q04323 297 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 CBX3Q13185 183 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 HEPACAMQ14CZ8 416 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 STX1AQ16623 288 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 MS4A18Q3C1V0 323 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 SNAI3Q3KNW1 292 aa2.66□□□□□ -1.98
CD46-215ENST00000488596 C2orf76Q3KRA6 126 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms