RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ACOT4Q8N9L9 421 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 DOK4Q8TEW6 326 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 ZNF473Q8WTR7 871 aaKnown RBP10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 MARVELD3Q96A59 401 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 C16orf45Q96MC5 204 aaPredicted RBP10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 MS4A8Q9BY19 250 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 OR8D2Q9GZM6 311 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 OR51B5Q9H339 312 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 ADAP2Q9NPF8 381 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 ACOT9Q9Y305 439 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 ANGPTL3Q9Y5C1 460 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 CLCA3PQ9Y6N3 262 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 HMX2A2RU54 273 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 WWP2O00308 870 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 CDC40O60508 579 aaKnown RBP eCLIP10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 CTNSO60931 367 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 ZFAND5O76080 213 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 MLYCDO95822 493 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 MTHFD2P13995 350 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 GFAPP14136 432 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 PRF1P14222 555 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 EPB42P16452 691 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 CPN2P22792 545 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 HPDP32754 393 aaPredicted RBP10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 TRHRP34981 398 aaPredicted RBP10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 PTGER1P34995 402 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 SSR2P43308 183 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 PIK3CGP48736 1102 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 GPR143P51810 404 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 ADORA2A-AS1P86434 159 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 CKAP4Q07065 602 aaKnown RBP10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 TBCCQ15814 346 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 PFKFB4Q16877 469 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 AP5B1Q2VPB7 878 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 IL20RBQ6UXL0 311 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 SIAH3Q8IW03 269 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 TMEM132CQ8N3T6 1108 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 OR7G3Q8NG95 312 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 ADAMTS18Q8TE60 1221 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 ZNF592Q92610 1267 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 SEC16BQ96JE7 1060 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 KCNC2Q96PR1 638 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 MTERF1Q99551 399 aaKnown RBP10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 PHACTR1Q9C0D0 580 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 VPS11Q9H270 941 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 SNX15Q9NRS6 342 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 ZDHHC18Q9NUE0 388 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 KCMF1Q9P0J7 381 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 CPSF2Q9P2I0 782 aaKnown RBP10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 ERVK-11Q9UQG0 969 aa10.52□□□□□ -0.73
NIPAL3-207ENST00000488155 A0A087X1B8 175 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 A0A096LPK6 155 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 TMEM200CA6NKL6 621 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 C17orf105B2RV13 164 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 G3V3Y1 287 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 TFECO14948 347 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 HNRNPRO43390 633 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 PEX1O43933 1283 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 HS6ST1O60243 411 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 ZNF500O60304 480 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 PRKRAO75569 313 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 OR2J2O76002 312 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 PDE9AO76083 593 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 SIX3O95343 332 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 ACSL3O95573 720 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 HIST1H1TP22492 207 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 HTR1EP28566 365 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 TYK2P29597 1187 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 CASP2P42575 452 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 SSR4P51571 173 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 NR0B1P51843 470 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 RAP1GDS1P52306 607 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 RPS13P62277 151 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 SLAMF1Q13291 335 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 NAB1Q13506 487 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 RCN2Q14257 317 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 CDSNQ15517 529 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 ELAVL1Q15717 326 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 CPSF6Q16630 551 aaKnown RBP eCLIP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 FAM83EQ2M2I3 478 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 ZNF750Q32MQ0 723 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 CHSY3Q70JA7 882 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 ZNF572Q7Z3I7 529 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 LAS2Q8IYD9 372 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 PLD6Q8N2A8 252 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 GHDCQ8N2G8 530 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 ZNF808Q8N4W9 903 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 SRFBP1Q8NEF9 429 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 HUS1BQ8NHY5 278 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 UHMK1Q8TAS1 419 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 PTPMT1Q8WUK0 201 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 UBTD2Q8WUN7 234 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 ASB15Q8WXK1 588 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 UBE2E3Q969T4 207 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 TBCDQ9BTW9 1192 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 TRIM45Q9H8W5 580 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 LYRM4Q9HD34 91 aa10.51□□□□□ -0.73
NIPAL3-207ENST00000488155 ZNF358Q9NW07 568 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms