RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 TRIM63Q969Q1 353 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 ITCHQ96J02 903 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 EGFL8Q99944 293 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 RHNO1Q9BSD3 238 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 CDADC1Q9BWV3 514 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 CCDC59Q9P031 241 aaKnown RBP13.1□□□□□ -0.31
COPS7B-221ENST00000488111 ADGRE2Q9UHX3 823 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 WBP11Q9Y2W2 641 aaKnown RBP13.1□□□□□ -0.31
COPS7B-221ENST00000488111 GRIP1Q9Y3R0 1128 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 ASB1Q9Y576 335 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 PCDHGB6Q9Y5F9 930 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 PRSS38A1L453 326 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 MITFO75030 526 aaPredicted RBP13.1□□□□□ -0.31
COPS7B-221ENST00000488111 CRCPO75575 148 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 LCKP06239 509 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 RPIAP49247 311 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 KIAA1024LP59773 190 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 PPP1R8Q12972 351 aaKnown RBP13.1□□□□□ -0.31
COPS7B-221ENST00000488111 DUSP7Q16829 419 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 CCSMST1Q4G0I0 132 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 ZNF542PQ5EBM4 170 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 VN1R5Q7Z5H4 357 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 SLC22A18ASQ8N1D0 253 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 ZNF540Q8NDQ6 660 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 OR2T12Q8NG77 320 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 OR2T11Q8NH01 316 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 GRPEL2Q8TAA5 225 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 SPACA7Q96KW9 195 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 HSPA12BQ96MM6 686 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 WDR92Q96MX6 357 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 ITPAQ9BY32 194 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 GABARAPL1Q9H0R8 117 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 MAGIXQ9H6Y5 334 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 CAB39Q9Y376 341 aaPredicted RBP13.1□□□□□ -0.31
COPS7B-221ENST00000488111 OARD1Q9Y530 152 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 CFAP20Q9Y6A4 193 aaKnown RBP13.1□□□□□ -0.31
COPS7B-221ENST00000488111 CACNA1IQ9P0X4 2223 aa13.1□□□□□ -0.31
COPS7B-221ENST00000488111 GSTA4O15217 222 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 CAPN5O15484 640 aaPredicted RBP13.09□□□□□ -0.31
COPS7B-221ENST00000488111 AIREO43918 545 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 SSX4O60224 188 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 MED26O95402 600 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 EFNA1P20827 205 aaPredicted RBP13.09□□□□□ -0.31
COPS7B-221ENST00000488111 BDKRB1P46663 353 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 SRSF5Q13243 272 aaKnown RBP13.09□□□□□ -0.31
COPS7B-221ENST00000488111 CEP78Q5JTW2 689 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 UTS2BQ765I0 119 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 ABI3BPQ7Z7G0 1075 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 GATAD2AQ86YP4 633 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 AMER2Q8N7J2 671 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 RNF170Q96K19 258 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 AASSQ9UDR5 926 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 GPR89AB7ZAQ6 455 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 GFYI3L273 518 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 SEMA3DO95025 777 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 RPS17P08708 135 aaKnown RBP13.09□□□□□ -0.31
COPS7B-221ENST00000488111 HOXC4P09017 264 aaPredicted RBP13.09□□□□□ -0.31
COPS7B-221ENST00000488111 GPR89BP0CG08 455 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 THEGLP0DJG4 465 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 UROSP10746 265 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 IGFBP5P24593 272 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 S100A5P33763 92 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 LIPAP38571 399 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 ARL1P40616 181 aaPredicted RBP13.09□□□□□ -0.31
COPS7B-221ENST00000488111 GPR50Q13585 617 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 ATP6AP1LQ52LC2 224 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 MICU2Q8IYU8 434 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 OXR1Q8N573 874 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 TMEM105Q8N8V8 129 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 CCL4L1Q8NHW4 92 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 IPCEF1Q8WWN9 437 aaPredicted RBP13.09□□□□□ -0.31
COPS7B-221ENST00000488111 TTC9Q92623 222 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 SLC12A9Q9BXP2 914 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 SEMA4BQ9NPR2 832 aaPredicted RBP13.09□□□□□ -0.31
COPS7B-221ENST00000488111 ARL15Q9NXU5 204 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 NUDT4Q9NZJ9 180 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 RAPGEFL1Q9UHV5 662 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 MKLN1Q9UL63 735 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 SATB2Q9UPW6 733 aa13.09□□□□□ -0.31
COPS7B-221ENST00000488111 ARHGEF33A8MVX0 844 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 ERVH48-1M5A8F1 160 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 IFRD1O00458 451 aaPredicted RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 TAPBPO15533 448 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 LAMTOR5O43504 91 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 KLK8O60259 260 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 FAM20BO75063 409 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 SCELO95171 688 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 C8GP07360 202 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 DBTP11182 482 aaKnown RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 GDF5P43026 501 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 RABIFP47224 123 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 YPEL5P62699 121 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 MAD2L1BPQ15013 274 aaPredicted RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 YIF1BQ5BJH7 314 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 C6orf136Q5SQH8 315 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 METRNLQ641Q3 311 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 SHQ1Q6PI26 577 aaKnown RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 SYVN1Q86TM6 617 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 CYP4Z1Q86W10 505 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms