RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 TRAFD1O14545 582 aaPredicted RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 KLHL41O60662 606 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 HEXIM1O94992 359 aaKnown RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 NR3C1P04150 777 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 ABOP16442 354 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 ITGAXP20702 1163 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 CHRNB4P30926 498 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 GTF2H1P32780 548 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 GPR1P46091 355 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 SUOXP51687 545 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 KPNA2P52292 529 aaKnown RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 DRG2P55039 364 aaKnown RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 RPL15P61313 204 aaKnown RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 SNRPFP62306 86 aaKnown RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 CEBPZQ03701 1054 aaKnown RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 RAD51Q06609 339 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 PMPCAQ10713 525 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 SF3A3Q12874 501 aaKnown RBP eCLIP4.07□□□□□ -1.76
CNN3-206ENST00000487539 TBRG1Q3YBR2 411 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 TRNP1Q6NT89 227 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 STXBP4Q6ZWJ1 553 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 TMEM110Q86TL2 294 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 NLRP14Q86W24 1093 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 MYLK4Q86YV6 388 aaPredicted RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 PAQR4Q8N4S7 273 aaPredicted RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 HCAR2Q8TDS4 363 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 NSMCE1Q8WV22 266 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 ROBO4Q8WZ75 1007 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 HAS2Q92819 552 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 ECHDC3Q96DC8 303 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 COX14Q96I36 57 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 IP6K3Q96PC2 410 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 NCAPGQ9BPX3 1015 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 HERPUD2Q9BSE4 406 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 PIMREGQ9BSJ6 248 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 DNAI2Q9GZS0 605 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 TNMDQ9H2S6 317 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 THAP9Q9H5L6 903 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 STN1Q9H668 368 aaKnown RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 RMI1Q9H9A7 625 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 OBP2BQ9NPH6 170 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 SEMA4BQ9NPR2 832 aaPredicted RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 YAE1D1Q9NRH1 226 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 DECR2Q9NUI1 292 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 LIN7CQ9NUP9 197 aaKnown RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 GPATCH2LQ9NWQ4 482 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 RAB20Q9NX57 234 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 STMN3Q9NZ72 180 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 DHCR7Q9UBM7 475 aaKnown RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 SLC12A4Q9UP95 1085 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 NEU3Q9UQ49 428 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 LRP12Q9Y561 859 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 CLIC4Q9Y696 253 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 ZNF407Q9C0G0 2248 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 HEATR5AQ86XA9 2040 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 PHF3Q92576 2039 aaKnown RBP4.06□□□□□ -1.76
CNN3-206ENST00000487539 FAM90A10PA6NDY2 464 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 NPIPB15A6NHN6 443 aaPredicted RBP4.06□□□□□ -1.76
CNN3-206ENST00000487539 C9J4A7 227 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 H3BMH7 237 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 H3BNX3 289 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 J3KR12 359 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 SYT5O00445 386 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 ARHGEF9O43307 516 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 REC8O95072 547 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 PSG1P11464 419 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 ZNF8P17098 575 aaPredicted RBP4.06□□□□□ -1.76
CNN3-206ENST00000487539 CYP2A7P20853 494 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 MMP11P24347 488 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 IL4RP24394 825 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 SERPINB3P29508 390 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 LMAN1P49257 510 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 CTSCP53634 463 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 CACNG1Q06432 222 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 STK4Q13043 487 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 PEX6Q13608 980 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 ANKRD1Q15327 319 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 INAQ16352 499 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 CAMK4Q16566 473 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 PFKFB4Q16877 469 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 FAM174BQ3ZCQ3 159 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 FILIP1LQ4L180 1135 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 CBWD6Q4V339 395 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 MIDNQ504T8 468 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 CBWD3Q5JTY5 395 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 DNTTIP2Q5QJE6 756 aaKnown RBP4.06□□□□□ -1.76
CNN3-206ENST00000487539 CBWD5Q5RIA9 395 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 HEPHL1Q6MZM0 1159 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 BRAT1Q6PJG6 821 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 LRRC31Q6UY01 552 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 COLCA1Q6ZS62 124 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 FAM183BPQ6ZVS7 135 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 ADGRF3Q8IZF5 1079 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 CLYBLQ8N0X4 340 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 FAM184AQ8NB25 1140 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 OR11G2Q8NGC1 345 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 LINC01560Q8TB33 94 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 STYXQ8WUJ0 223 aa4.06□□□□□ -1.76
CNN3-206ENST00000487539 ASB5Q8WWX0 329 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms