RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 RGS4P49798 205 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 CTBP2P56545 445 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 SNRPGP62308 76 aaKnown RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 EFEMP1Q12805 493 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 C1DQ13901 141 aaKnown RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 SNAPC1Q16533 368 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 LGALSLQ3ZCW2 172 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 KLHL12Q53G59 568 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 TMEM107Q6UX40 140 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 TRILQ7L0X0 811 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 BMP8AQ7Z5Y6 402 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 STK40Q8N2I9 435 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 C11orf65Q8NCR3 313 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 OR8J2Q8NGG1 315 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 OR10Z1Q8NGY1 313 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 RIT1Q92963 219 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 LPPQ93052 612 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 RBPMSQ93062 196 aaKnown RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 SENP5Q96HI0 755 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF578Q96N58 590 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 TSSK6Q9BXA6 273 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 FOLH1BQ9HBA9 442 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 ZC4H2Q9NQZ6 224 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 CUEDC1Q9NWM3 386 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 FAM120CQ9NX05 1096 aaKnown RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 SLCO1C1Q9NYB5 712 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 SPIN1Q9Y657 262 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-208ENST00000486641 PTPRDP23468 1912 aa10.18□□□□□ -0.78
CCDC171-208ENST00000486641 MYO16Q9Y6X6 1858 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 KCNE1BA0A087WTH5 132 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 PRAMEF33A0A0G2JMD5 474 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 ANKRD66B4E2M5 251 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 SGK494L7N484 410 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 NDUFA2O43678 99 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 PRAMEF10O60809 474 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 TP53P04637 393 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-208ENST00000486641 SMIM10L2AP0DMW4 78 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 SMIM10L2BP0DMW5 78 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 DGKAP23743 735 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 HMGB2P26583 209 aaKnown RBP10.17□□□□□ -0.78
CCDC171-208ENST00000486641 NNMTP40261 264 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 ETV5P41161 510 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 ETV1P50549 477 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 HMGA2P52926 109 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 YBEYP58557 167 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-208ENST00000486641 BTG1P62324 171 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF91Q05481 1191 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 RBBP4Q09028 425 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 BAMBIQ13145 260 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 GAB1Q13480 694 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 CRTC2Q53ET0 693 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-208ENST00000486641 COX20Q5RI15 118 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 BCL2L15Q5TBC7 163 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF772Q68DY9 489 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-208ENST00000486641 DLK2Q6UY11 383 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 SCN4BQ8IWT1 228 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 CFAP52Q8N1V2 620 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 OR7D4Q8NG98 312 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 FBXW5Q969U6 566 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 MARC2Q969Z3 335 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 RBP7Q96R05 134 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 PIP5K1AQ99755 562 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 MROH8Q9H579 483 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 THSD1Q9NS62 852 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-208ENST00000486641 RPL36Q9Y3U8 105 aaKnown RBP10.17□□□□□ -0.78
CCDC171-208ENST00000486641 PCDHB1Q9Y5F3 818 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 GJA3Q9Y6H8 435 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 UTRNP46939 3433 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 SOX14O95416 240 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 CFDP00746 253 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-208ENST00000486641 IFNA7P01567 189 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 BPIP17213 487 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 CRATP43155 626 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 XCR1P46094 333 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 AVPR1BP47901 424 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 CACNG1Q06432 222 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 GPR176Q14439 515 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 TEAD4Q15561 434 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 UPP1Q16831 310 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 ZXDCQ2QGD7 858 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-208ENST00000486641 PLK5Q496M5 336 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 ATAT1Q5SQI0 421 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 NDUFAF5Q5TEU4 345 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 BICRALQ6AI39 1079 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 METAP1DQ6UB28 335 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-208ENST00000486641 CEACAM20Q6UY09 585 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 METTL23Q86XA0 190 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 MIB1Q86YT6 1006 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 CEP76Q8TAP6 659 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 ATF6BQ99941 703 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 DUSP26Q9BV47 211 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 CINPQ9BW66 212 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-208ENST00000486641 SLC32A1Q9H598 525 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 FLRT1Q9NZU1 646 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 KCMF1Q9P0J7 381 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 UBQLN2Q9UHD9 624 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 ENOPH1Q9UHY7 261 aa10.17□□□□□ -0.78
CCDC171-208ENST00000486641 SF3B6Q9Y3B4 125 aaKnown RBP10.17□□□□□ -0.78
CCDC171-208ENST00000486641 LTBP3Q9NS15 1303 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms