RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 KCTD4Q8WVF5 259 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 CYGBQ8WWM9 190 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 TAMM41Q96BW9 452 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ZNF501Q96CX3 271 aaPredicted RBP10.24□□□□□ -0.77
DDX56-212ENST00000485367 MFSD3Q96ES6 412 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 RAD21L1Q9H4I0 556 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 FANCEQ9HB96 536 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 LHX9Q9NQ69 397 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ACTR10Q9NZ32 417 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 CCDC167Q9P0B6 97 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 KCND3Q9UK17 655 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 PLAGL1Q9UM63 463 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ICKQ9UPZ9 632 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 BTRCQ9Y297 605 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 PCDHB3Q9Y5E6 796 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 BOD1L1Q8NFC6 3051 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 PIPSLA2A3N6 862 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 IQCF5A8MTL0 148 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 TERTO14746 1132 aaKnown RBP10.24□□□□□ -0.77
DDX56-212ENST00000485367 SLC28A2O43868 658 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ABCB7O75027 752 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 PVRP15151 417 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ST6GAL1P15907 406 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ZNF182P17025 639 aaPredicted RBP10.24□□□□□ -0.77
DDX56-212ENST00000485367 CD247P20963 164 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 CCR7P32248 378 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 SHMT2P34897 504 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ADARB1P78563 741 aaKnown RBP10.24□□□□□ -0.77
DDX56-212ENST00000485367 NFKB2Q00653 900 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 POU4F1Q01851 419 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 HSPA14Q0VDF9 509 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ILF2Q12905 390 aaKnown RBP10.24□□□□□ -0.77
DDX56-212ENST00000485367 KCNAB2Q13303 367 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 CYBRD1Q53TN4 286 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 AGAP7PQ5VUJ5 663 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 PTRHD1Q6GMV3 140 aaKnown RBP10.24□□□□□ -0.77
DDX56-212ENST00000485367 FAM199XQ6PEV8 388 aaPredicted RBP10.24□□□□□ -0.77
DDX56-212ENST00000485367 FKBP9P1Q75LS8 142 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 PRICKLE2Q7Z3G6 844 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 IGFN1Q86VF2 1251 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ADGRG5Q8IZF4 528 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 OR8K5Q8NH50 307 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 LKAAEAR1Q8TD35 194 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 MR1Q95460 341 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 RDH12Q96NR8 316 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 ADNPQ9H2P0 1102 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 AKIRIN1Q9H9L7 192 aaPredicted RBP10.24□□□□□ -0.77
DDX56-212ENST00000485367 NANOGQ9H9S0 305 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 TREX1Q9NSU2 369 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 STARD5Q9NSY2 213 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 IFT80Q9P2H3 777 aaPredicted RBP10.24□□□□□ -0.77
DDX56-212ENST00000485367 POLG2Q9UHN1 485 aa10.24□□□□□ -0.77
DDX56-212ENST00000485367 CDC14CA4D256 554 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 TMEM150CB9EJG8 249 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 PRMT5O14744 637 aaPredicted RBP10.23□□□□□ -0.77
DDX56-212ENST00000485367 PHGDHO43175 533 aaKnown RBP10.23□□□□□ -0.77
DDX56-212ENST00000485367 CPNE3O75131 537 aaKnown RBP10.23□□□□□ -0.77
DDX56-212ENST00000485367 NDUFS3O75489 264 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 RBP1P09455 135 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 GFAPP14136 432 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 GSTM2P28161 218 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 GLRBP48167 497 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 TTPAP49638 278 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 GABARAPL2P60520 117 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 ABRQ12979 859 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 ITGADQ13349 1161 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 FAM83EQ2M2I3 478 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 PRAMEF17Q5VTA0 474 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 FAAH2Q6GMR7 532 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 GALNT18Q6P9A2 607 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 CNSTQ6PJW8 725 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 SPESP1Q6UW49 350 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 CUZD1Q86UP6 607 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 PTRH1Q86Y79 214 aaKnown RBP10.23□□□□□ -0.77
DDX56-212ENST00000485367 VRK3Q8IV63 474 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 ZC3H7AQ8IWR0 971 aaKnown RBP10.23□□□□□ -0.77
DDX56-212ENST00000485367 DDIASQ8IXT1 998 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 OR5K2Q8NHB8 316 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 GABPB2Q8TAK5 448 aaPredicted RBP10.23□□□□□ -0.77
DDX56-212ENST00000485367 APOBEC4Q8WW27 367 aaKnown RBP10.23□□□□□ -0.77
DDX56-212ENST00000485367 ASZ1Q8WWH4 475 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 VMP1Q96GC9 406 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 TRIM54Q9BYV2 358 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 TWSG1Q9GZX9 223 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 SLC25A18Q9H1K4 315 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 SPHK1Q9NYA1 384 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 OAZ3Q9UMX2 235 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 AURKCQ9UQB9 309 aa10.23□□□□□ -0.77
DDX56-212ENST00000485367 FAM95CA0A1B0GW59 222 aa10.22□□□□□ -0.77
DDX56-212ENST00000485367 TMEM233B4DJY2 109 aa10.22□□□□□ -0.77
DDX56-212ENST00000485367 C21orf140B9A014 251 aa10.22□□□□□ -0.77
DDX56-212ENST00000485367 J3QKU1 62 aa10.22□□□□□ -0.77
DDX56-212ENST00000485367 NME4O00746 187 aa10.22□□□□□ -0.77
DDX56-212ENST00000485367 PFDN6O15212 129 aa10.22□□□□□ -0.77
DDX56-212ENST00000485367 CREG1O75629 220 aa10.22□□□□□ -0.77
DDX56-212ENST00000485367 IPO13O94829 963 aaKnown RBP10.22□□□□□ -0.77
DDX56-212ENST00000485367 SEC24DO94855 1032 aaPredicted RBP10.22□□□□□ -0.77
DDX56-212ENST00000485367 MATN4O95460 622 aa10.22□□□□□ -0.77
DDX56-212ENST00000485367 CHRM5P08912 532 aaPredicted RBP10.22□□□□□ -0.77
DDX56-212ENST00000485367 UGT2B7P16662 529 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms