RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ASB18Q6ZVZ8 466 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 FAM47BQ8NA70 645 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 TMEM52Q8NDY8 209 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 OR6Y1Q8NGX8 325 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 METTL6Q8TCB7 284 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 CNDP1Q96KN2 507 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 PTCHD1Q96NR3 888 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 LPAR4Q99677 370 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 MAPKAP1Q9BPZ7 522 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 SORBS1Q9BX66 1292 aaKnown RBP14.91□□□□□ -0.02
UPF3A-208ENST00000484246 STMN4Q9H169 189 aaPredicted RBP14.91□□□□□ -0.02
UPF3A-208ENST00000484246 MMP25Q9NPA2 562 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 MID1IP1Q9NPA3 183 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 NECTIN3Q9NQS3 549 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 FARSBQ9NSD9 589 aaKnown RBP14.91□□□□□ -0.02
UPF3A-208ENST00000484246 RYDENQ9NUL5 291 aaKnown RBP14.91□□□□□ -0.02
UPF3A-208ENST00000484246 NMRK1Q9NWW6 199 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 PPIEQ9UNP9 301 aaKnown RBP14.91□□□□□ -0.02
UPF3A-208ENST00000484246 ASB4Q9Y574 426 aa14.91□□□□□ -0.02
UPF3A-208ENST00000484246 SAGE2PA6NJ88 616 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 MASP2O00187 686 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 TMPRSS11DO60235 418 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 CTNSO60931 367 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 SH3BGRLO75368 114 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 ULK1O75385 1050 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 EEDO75530 441 aaKnown RBP14.9□□□□□ -0.02
UPF3A-208ENST00000484246 SEC24DO94855 1032 aaPredicted RBP14.9□□□□□ -0.02
UPF3A-208ENST00000484246 PRB1P04280 392 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 BPGMP07738 259 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 MYZAPP0CAP1 466 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 DHRS4L1P0CG22 281 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 MAOAP21397 527 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 SOX11P35716 441 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 HNRNPH2P55795 449 aaKnown RBP14.9□□□□□ -0.02
UPF3A-208ENST00000484246 OR4D2P58180 307 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 IGLV3-21P80748 117 aaPredicted RBP14.9□□□□□ -0.02
UPF3A-208ENST00000484246 SLAMF1Q13291 335 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 TCHHL1Q5QJ38 904 aaPredicted RBP14.9□□□□□ -0.02
UPF3A-208ENST00000484246 PAGE2Q7Z2X7 111 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 GPR180Q86V85 440 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 M1APQ8TC57 530 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 PSMF1Q92530 271 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 ANAPC2Q9UJX6 822 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 SLC12A4Q9UP95 1085 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 NUP210LQ5VU65 1888 aa14.9□□□□□ -0.02
UPF3A-208ENST00000484246 IGHV3-20A0A0C4DH32 117 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 A6NL46 340 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 B8ZZF3 427 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 NPIPB8E9PQR5 432 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 TGFBR3LH3BV60 316 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 DPM1O60762 260 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 H2AFXP16104 143 aaPredicted RBP14.89□□□□□ -0.03
UPF3A-208ENST00000484246 TPP2P29144 1249 aaPredicted RBP14.89□□□□□ -0.03
UPF3A-208ENST00000484246 PPP2R1BP30154 601 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 BUD31P41223 144 aaPredicted RBP14.89□□□□□ -0.03
UPF3A-208ENST00000484246 SERPINB4P48594 390 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 HTR6P50406 440 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 SLC26A5P58743 744 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 NFATC3Q12968 1075 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 SERTAD2Q14140 314 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 CASP8Q14790 479 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 SGO1Q5FBB7 561 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 CRB2Q5IJ48 1285 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 COMMD6Q7Z4G1 85 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 TRIM46Q7Z4K8 759 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 PARP9Q8IXQ6 854 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 TM9SF4Q92544 642 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 MTFMTQ96DP5 389 aaKnown RBP14.89□□□□□ -0.03
UPF3A-208ENST00000484246 C11orf24Q96F05 449 aaPredicted RBP14.89□□□□□ -0.03
UPF3A-208ENST00000484246 THOC3Q96J01 351 aaKnown RBP14.89□□□□□ -0.03
UPF3A-208ENST00000484246 PKNOX2Q96KN3 472 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 MRPL1Q9BYD6 325 aaKnown RBP14.89□□□□□ -0.03
UPF3A-208ENST00000484246 ACPTQ9BZG2 426 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 PRM3Q9NNZ6 103 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 ADAP2Q9NPF8 381 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 ZNF71Q9NQZ8 489 aaPredicted RBP14.89□□□□□ -0.03
UPF3A-208ENST00000484246 SIRT5Q9NXA8 310 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 VPS29Q9UBQ0 182 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 BOLA1Q9Y3E2 137 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 ATG4BQ9Y4P1 393 aa14.89□□□□□ -0.03
UPF3A-208ENST00000484246 TLN1Q9Y490 2541 aaKnown RBP14.89□□□□□ -0.03
UPF3A-208ENST00000484246 BIRC5O15392 142 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 PROM1O43490 865 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 ZWINTO95229 277 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 FAM58BPP0C7Q3 252 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 NR2F6P10588 404 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 UROSP10746 265 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 NR1D1P20393 614 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 CPN2P22792 545 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 TLX1P31314 330 aaPredicted RBP14.88□□□□□ -0.03
UPF3A-208ENST00000484246 SLC18A1P54219 525 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 FOXA1P55317 472 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 C19orf57Q0VDD7 668 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 KLRB1Q12918 225 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 SLC13A2Q13183 592 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 BIKQ13323 160 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 MFAP5Q13361 173 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 ELAVL1Q15717 326 aaKnown RBP14.88□□□□□ -0.03
UPF3A-208ENST00000484246 AGAP7PQ5VUJ5 663 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 H3F3CQ6NXT2 135 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms