RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ST6GAL1P15907 406 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 NPPBP16860 134 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 DDX5P17844 614 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SLC6A2P23975 617 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 NDUFS1P28331 727 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 IL12AP29459 219 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PEBP1P30086 187 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SERPINB1P30740 379 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 MSX2P35548 267 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 HPCAL1P37235 193 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 RPL3P39023 403 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 MRPS22P82650 360 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 RHDQ02161 417 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SRSF11Q05519 484 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 E2F2Q14209 437 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 CAPRIN1Q14444 709 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 KIAA0040Q15053 153 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 TLR1Q15399 786 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PAGE3Q5JUK9 113 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SLC2A7Q6PXP3 512 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 IGF2-ASQ6U949 168 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SUSD1Q6UWL2 747 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SLCO4C1Q6ZQN7 724 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 MSANTD1Q6ZTZ1 278 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 GPR180Q86V85 440 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PLXDC1Q8IUK5 500 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 TMEM126BQ8IUX1 230 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 AQP12AQ8IXF9 295 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SLC15A3Q8IY34 581 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 TMEM132CQ8N3T6 1108 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 TBC1D19Q8N5T2 526 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 FAM156AQ8NDB6 213 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 VPS37AQ8NEZ2 397 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 OR7G3Q8NG95 312 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 OR8J3Q8NGG0 315 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 HUS1BQ8NHY5 278 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 ZUFSPQ96AP4 578 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 TESCQ96BS2 214 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 APIPQ96GX9 242 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 ITCHQ96J02 903 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 TSSK3Q96PN8 268 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 OR52E6Q96RD3 313 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 MTERF1Q99551 399 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 CGREF1Q99674 301 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 KCTD14Q9BQ13 255 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 ECSITQ9BQ95 431 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 AIF1LQ9BQI0 150 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SLC39A3Q9BRY0 314 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 CENPKQ9BS16 269 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SEMA4CQ9C0C4 833 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PITHD1Q9GZP4 211 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 VCXQ9H320 206 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 ZNF768Q9H5H4 540 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 MVB12BQ9H7P6 319 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PELI2Q9HAT8 420 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SLC52A3Q9NQ40 469 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PDP2Q9P2J9 529 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PCDHA9Q9Y5H5 950 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 COLEC10Q9Y6Z7 277 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PCSK5Q92824 1860 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 CFAP46Q8IYW2 2715 aa6.59□□□□□ -1.35
BRCA1-216ENST00000484087 LOC101059948A0A1B0GTJ6 334 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 GNG14A0A1W2PPG7 69 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 PIPSLA2A3N6 862 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 ANKDD1BA6NHY2 528 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 SLC9B1P1A6NJY1 282 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 MAGEB17A8MXT2 336 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 FXYD1O00168 92 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 NME4O00746 187 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 ACOT8O14734 319 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 RAD1O60671 282 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 PRAMEF4O60810 478 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 STK17BO94768 372 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 CCNDBP1O95273 360 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 C8BP07358 591 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 ERGP11308 486 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 LIFP15018 202 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 ACADSP16219 412 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 SDC1P18827 310 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 CD22P20273 847 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 IL10P22301 178 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 F8A1P23610 371 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 PSMA4P25789 261 aaKnown RBP6.59□□□□□ -1.36
BRCA1-216ENST00000484087 PTX3P26022 381 aaPredicted RBP6.59□□□□□ -1.36
BRCA1-216ENST00000484087 PSMB5P28074 263 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 SLC7A1P30825 629 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 GRK3P35626 688 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 PIK3CBP42338 1070 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 KIR3DL1P43629 444 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 ZFP36L2P47974 494 aaKnown RBP6.59□□□□□ -1.36
BRCA1-216ENST00000484087 RAB28P51157 221 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 CCR8P51685 355 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 DGKQP52824 942 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 TMPRSS3P57727 454 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 FOXL2P58012 376 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 RPS13P62277 151 aaKnown RBP6.59□□□□□ -1.36
BRCA1-216ENST00000484087 YBX1P67809 324 aaKnown RBP6.59□□□□□ -1.36
BRCA1-216ENST00000484087 MS4A2Q01362 244 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 LIPEQ05469 1076 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms