RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 RNF4P78317 190 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 HYAL4Q2M3T9 481 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 RIPPLY2Q5TAB7 128 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 TTC27Q6P3X3 843 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 BIVMQ86UB2 503 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 KLHDC8AQ8IYD2 350 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 GOLM1Q8NBJ4 401 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 MORN4Q8NDC4 146 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 FAM222BQ8WU58 562 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 GAL3ST3Q96A11 431 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 MAGOHBQ96A72 148 aaKnown RBP11.85□□□□□ -0.51
TMEM54-206ENST00000482771 MBD6Q96DN6 1003 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 MS4A6EQ96DS6 147 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 OR8D2Q9GZM6 311 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 B4GALT7Q9UBV7 327 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 VTI1BQ9UEU0 232 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 IKZF3Q9UKT9 509 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 MRPS33Q9Y291 106 aaKnown RBP11.85□□□□□ -0.51
TMEM54-206ENST00000482771 VPS13CQ709C8 3753 aa11.85□□□□□ -0.51
TMEM54-206ENST00000482771 HSPB2A8KAH6 182 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 GOLGA6L6A8MZA4 724 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 CYR61O00622 381 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 HCN1O60741 890 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 ENO2P09104 434 aaPredicted RBP11.84□□□□□ -0.51
TMEM54-206ENST00000482771 C1GALT1C1LP0DN25 315 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 CCL3P10147 92 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 HNRNPH1P31943 449 aaKnown RBP11.84□□□□□ -0.51
TMEM54-206ENST00000482771 PIGAP37287 484 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 STX4Q12846 297 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 DAZAP2Q15038 168 aaPredicted RBP11.84□□□□□ -0.51
TMEM54-206ENST00000482771 HSPB2Q16082 182 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 BBS9Q3SYG4 887 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 FLYWCH1Q4VC44 716 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 OPN5Q6U736 354 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 TMIGD1Q6UXZ0 262 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.84□□□□□ -0.51
TMEM54-206ENST00000482771 GPATCH11Q8N954 259 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 SPC24Q8NBT2 197 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 WFDC11Q8NEX6 87 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 OR5L2Q8NGL0 311 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 GABPB2Q8TAK5 448 aaPredicted RBP11.84□□□□□ -0.51
TMEM54-206ENST00000482771 CAPZA3Q96KX2 299 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 QRFPRQ96P65 431 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 GRPEL1Q9HAV7 217 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 DMRT3Q9NQL9 472 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 SPRR3Q9UBC9 169 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 CBLCQ9ULV8 474 aa11.84□□□□□ -0.51
TMEM54-206ENST00000482771 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.84□□□□□ -0.51
TMEM54-206ENST00000482771 C17orf105B2RV13 164 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 CCDC175P0C221 793 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 RFPL3SP0C7P2 107 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 PGAM1P18669 254 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 ENDOUP21128 410 aaKnown RBP11.83□□□□□ -0.52
TMEM54-206ENST00000482771 BMP5P22003 454 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 GDF5P43026 501 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 LIM2P55344 173 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 KEAP1Q14145 624 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 CRYMQ14894 314 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 EFTUD2Q15029 972 aaKnown RBP eCLIP11.83□□□□□ -0.52
TMEM54-206ENST00000482771 DEFB113Q30KQ7 82 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 PIGGQ5H8A4 983 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 FBXW10Q5XX13 1052 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 SLC22A10Q63ZE4 541 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 SBSNQ6UWP8 590 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 SLCO4C1Q6ZQN7 724 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 SEM1Q6ZVN7 128 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 NAT8LQ8N9F0 302 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 TTLQ8NG68 377 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 OR14A16Q8NHC5 309 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 RNASE6Q93091 150 aaKnown RBP11.83□□□□□ -0.52
TMEM54-206ENST00000482771 LRRC46Q96FV0 321 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 PDLIM5Q96HC4 596 aaKnown RBP11.83□□□□□ -0.52
TMEM54-206ENST00000482771 CSF3RQ99062 836 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 PPANQ9NQ55 473 aaKnown RBP11.83□□□□□ -0.52
TMEM54-206ENST00000482771 SLC17A6Q9P2U8 582 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 ATG4BQ9Y4P1 393 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 NINQ8N4C6 2090 aa11.83□□□□□ -0.52
TMEM54-206ENST00000482771 HRNRQ86YZ3 2850 aaPredicted RBP11.83□□□□□ -0.52
TMEM54-206ENST00000482771 NSD1Q96L73 2696 aaPredicted RBP11.83□□□□□ -0.52
TMEM54-206ENST00000482771 FBN3Q75N90 2809 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 FN1P02751 2386 aaKnown RBP11.82□□□□□ -0.52
TMEM54-206ENST00000482771 A0A088AWK7 358 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 ANKDD1BA6NHY2 528 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 CDC7O00311 574 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 DVL2O14641 736 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 LDB3O75112 727 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 ATE1O95260 518 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 RAF1P04049 648 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 GNAZP19086 355 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 ZNF10P21506 573 aaPredicted RBP11.82□□□□□ -0.52
TMEM54-206ENST00000482771 ADSLP30566 484 aaPredicted RBP11.82□□□□□ -0.52
TMEM54-206ENST00000482771 MTTPP55157 894 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 ASPHQ12797 758 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 RCN2Q14257 317 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 SLBPQ14493 270 aaKnown RBP eCLIP11.82□□□□□ -0.52
TMEM54-206ENST00000482771 C18orf21Q32NC0 220 aaPredicted RBP11.82□□□□□ -0.52
TMEM54-206ENST00000482771 TEDDM1Q5T9Z0 273 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 PAMR1Q6UXH9 720 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 CHSY3Q70JA7 882 aa11.82□□□□□ -0.52
TMEM54-206ENST00000482771 ULK2Q8IYT8 1036 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms