RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 ZNF223Q9UK11 482 aaPredicted RBP12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 ACOT9Q9Y305 439 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 TEP1Q99973 2627 aaKnown RBP12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 ESYT3A0FGR9 886 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 HMX2A2RU54 273 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 SYCE1LA8MT33 242 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 A8MVJ9 347 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 K7EPI3 171 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 TFECO14948 347 aaPredicted RBP12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 KERAO60938 352 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 CLDN14O95500 239 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 TGFB1P01137 390 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 SLC35E2BP0CK96 405 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 PCNAP12004 261 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 COX6B1P14854 86 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 EPB42P16452 691 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 TNFRSF8P28908 595 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 SERPINB1P30740 379 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 ETF1P62495 437 aaKnown RBP12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 HSF1Q00613 529 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 GUCY2DQ02846 1103 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 E2F2Q14209 437 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 PAOXQ6QHF9 649 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 HSDL2Q6YN16 418 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 ZNF572Q7Z3I7 529 aaPredicted RBP12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 CCDC91Q7Z6B0 441 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 DOLPP1Q86YN1 238 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 LAS2Q8IYD9 372 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 ACOT4Q8N9L9 421 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 OR14A16Q8NHC5 309 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 AGAP11Q8TF27 550 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 PHF10Q8WUB8 498 aaKnown RBP12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 ASB15Q8WXK1 588 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 CMTM7Q96FZ5 175 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 CSF3RQ99062 836 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 MAPKAP1Q9BPZ7 522 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 MS4A8Q9BY19 250 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 HPF1Q9NWY4 346 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 KCMF1Q9P0J7 381 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 MYOTQ9UBF9 498 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 ANGPTL3Q9Y5C1 460 aa12.51□□□□□ -0.41
CTDSP1-208ENST00000482272 A0A087X1B8 175 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 A0A1B0GTH9 108 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 MYOCOSA0A1B0GUC4 107 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 CCDC189A1A4V9 331 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 C17orf105B2RV13 164 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 E9PLN8 166 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 HS6ST1O60243 411 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 PRKNO60260 465 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 CDC40O60508 579 aaKnown RBP eCLIP12.5□□□□□ -0.411e-7■■■□□ 15
CTDSP1-208ENST00000482272 OR2J2O76002 312 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 TUBB4AP04350 444 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 PRF1P14222 555 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 CPN2P22792 545 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 ATP5A1P25705 553 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 PTGS2P35354 604 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 PTGER4P35408 488 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 IRF9Q00978 393 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 SLC7A5Q01650 507 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 PCDH1Q08174 1060 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 BIKQ13323 160 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 FAM83EQ2M2I3 478 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 IL20RBQ6UXL0 311 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 MDGA2Q7Z553 956 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 UBE3DQ7Z6J8 389 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 CHERPQ8IWX8 916 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 RNF175Q8N4F7 328 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 ZFP62Q8NB50 900 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 PSD4Q8NDX1 1056 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 OR7G3Q8NG95 312 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 OR5L2Q8NGL0 311 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 OR8K3Q8NH51 312 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 RHEBL1Q8TAI7 183 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 FAM57AQ8TBR7 257 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 PTPMT1Q8WUK0 201 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 NXNL1Q96CM4 212 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 MTFMTQ96DP5 389 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 PHF12Q96QT6 1004 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 ATOH8Q96SQ7 321 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 VKORC1Q9BQB6 163 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 CENPKQ9BS16 269 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 OR8D2Q9GZM6 311 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 LIN28AQ9H9Z2 209 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 MS4A12Q9NXJ0 267 aa12.5□□□□□ -0.41
CTDSP1-208ENST00000482272 TMEM200CA6NKL6 621 aa12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 UBXN8O00124 270 aa12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 WWP2O00308 870 aa12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 RTCAO00442 366 aaKnown RBP12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 LDB3O75112 727 aa12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 SNRPB2P08579 225 aaKnown RBP12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 COX7A2P14406 83 aa12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 HIST1H1TP22492 207 aaPredicted RBP12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 TLX1P31314 330 aaPredicted RBP12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 PTGER1P34995 402 aa12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 RFC3P40938 356 aa12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 SSR2P43308 183 aa12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 NR0B1P51843 470 aaKnown RBP12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 GPR85P60893 370 aa12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 DEPDC1Q5TB30 811 aa12.49□□□□□ -0.41
CTDSP1-208ENST00000482272 KHDRBS2Q5VWX1 349 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms