RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 OR2T29Q8NH02 315 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 SETD7Q8WTS6 366 aaKnown RBP13.77□□□□□ -0.21
CHD3-211ENST00000481999 CSF3RQ99062 836 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 C17orf62Q9BQA9 187 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 TIMM29Q9BSF4 260 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 FUNDC2Q9BWH2 189 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 DGCR6LQ9BY27 220 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 REEP4Q9H6H4 257 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 TM9SF3Q9HD45 589 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 SLC6A20Q9NP91 592 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 IL1RAPQ9NPH3 570 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 RPS6KA6Q9UK32 745 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 CYP8B1Q9UNU6 501 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 NCKAP1Q9Y2A7 1128 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 GLOD5A6NK44 160 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 PTGES3LE9PB15 166 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 OPN1SWP03999 348 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 RPN2P04844 631 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 ETFAP13804 333 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 HPCAL1P37235 193 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 CCR8P51685 355 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 RPS26P62854 115 aaKnown RBP13.76□□□□□ -0.21
CHD3-211ENST00000481999 IL5RAQ01344 420 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 PIGFQ07326 219 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 CDK5R2Q13319 367 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 KHDRBS2Q5VWX1 349 aaKnown RBP13.76□□□□□ -0.21
CHD3-211ENST00000481999 GPR155Q7Z3F1 870 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 UBE3DQ7Z6J8 389 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 ZNF554Q86TJ5 538 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 ABHD11Q8NFV4 315 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 FKBP10Q96AY3 582 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 OR2M4Q96R27 311 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 BARD1Q99728 777 aaKnown RBP13.76□□□□□ -0.21
CHD3-211ENST00000481999 MS4A8Q9BY19 250 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 VNN3Q9NY84 501 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 TAAR2Q9P1P5 351 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 ZNF624Q9P2J8 865 aaPredicted RBP13.76□□□□□ -0.21
CHD3-211ENST00000481999 DNMT3AQ9Y6K1 912 aaPredicted RBP13.76□□□□□ -0.21
CHD3-211ENST00000481999 HSPE1-MOB4S4R3N1 261 aa13.76□□□□□ -0.21
CHD3-211ENST00000481999 hCG_2039718K7EN88 272 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 M0QX08 132 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 HAT1O14929 419 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 CBFA2T3O75081 653 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 TNFRSF1BP20333 461 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 BCL6P41182 706 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 PIK3CBP42338 1070 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 ASMTP46597 345 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 CCR3P51677 355 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 KEAP1Q14145 624 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 VMACQ2NL98 169 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 FAM71E1Q6IPT2 247 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 TRIM73Q86UV7 250 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 SLC22A18ASQ8N1D0 253 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 KRT78Q8N1N4 520 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 TRUB1Q8WWH5 349 aaKnown RBP13.75□□□□□ -0.21
CHD3-211ENST00000481999 PPCDCQ96CD2 204 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 COQ8BQ96D53 544 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 AIF1LQ9BQI0 150 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 TPSD1Q9BZJ3 242 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 WASH6PQ9NQA3 447 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 KLF15Q9UIH9 416 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 ENPP5Q9UJA9 477 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 ABCG2Q9UNQ0 655 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 PCDHGB1Q9Y5G3 927 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 NINQ8N4C6 2090 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 SPTBP11277 2137 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 ABCA7Q8IZY2 2146 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 PRAMEF10O60809 474 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 ZBTB11O95625 1053 aaPredicted RBP13.75□□□□□ -0.21
CHD3-211ENST00000481999 ANGPTL1O95841 491 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 GPX2P18283 190 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 PCMT1P22061 227 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 BSGP35613 385 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 CRATP43155 626 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 MVDP53602 400 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 PRDX1Q06830 199 aaKnown RBP13.75□□□□□ -0.21
CHD3-211ENST00000481999 FOXD4Q12950 439 aaPredicted RBP13.75□□□□□ -0.21
CHD3-211ENST00000481999 RAPSNQ13702 412 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 COL19A1Q14993 1142 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 ARHGAP19Q14CB8 494 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 DEPDC1Q5TB30 811 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 KIAA1614Q5VZ46 1190 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 CYP4Z1Q86W10 505 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 ZNF761Q86XN6 746 aaPredicted RBP13.75□□□□□ -0.21
CHD3-211ENST00000481999 OR13H1Q8NG92 308 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 ZFP90Q8TF47 636 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 TEFMQ96QE5 360 aaKnown RBP13.75□□□□□ -0.21
CHD3-211ENST00000481999 DPH7Q9BTV6 452 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 C1QTNF7Q9BXJ2 289 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 CCDC90BQ9GZT6 254 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 DNAAF2Q9NVR5 837 aaKnown RBP13.75□□□□□ -0.21
CHD3-211ENST00000481999 PAK1IP1Q9NWT1 392 aaPredicted RBP13.75□□□□□ -0.21
CHD3-211ENST00000481999 MAP4K5Q9Y4K4 846 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 PCDHB11Q9Y5F2 797 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 SNX8Q9Y5X2 465 aa13.75□□□□□ -0.21
CHD3-211ENST00000481999 A0A1W2PS29 197 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 ZNF99A8MXY4 864 aaPredicted RBP13.74□□□□□ -0.21
CHD3-211ENST00000481999 GPR89AB7ZAQ6 455 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 BTN3A3O00478 584 aa13.74□□□□□ -0.21
CHD3-211ENST00000481999 MBTPS2O43462 519 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms