RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 ANKRD20A1Q5TYW2 823 aa4□□□□□ -1.77
CALD1-219ENST00000480638 ANKRD20A3Q5VUR7 823 aa4□□□□□ -1.77
CALD1-219ENST00000480638 ARMC3Q5W041 872 aa4□□□□□ -1.77
CALD1-219ENST00000480638 EMBQ6PCB8 327 aa4□□□□□ -1.77
CALD1-219ENST00000480638 OTOAQ7RTW8 1153 aa4□□□□□ -1.77
CALD1-219ENST00000480638 CACUL1Q86Y37 369 aa4□□□□□ -1.77
CALD1-219ENST00000480638 SIAH3Q8IW03 269 aa4□□□□□ -1.77
CALD1-219ENST00000480638 KLHDC8AQ8IYD2 350 aa4□□□□□ -1.77
CALD1-219ENST00000480638 ZNF444Q8N0Y2 327 aaPredicted RBP4□□□□□ -1.77
CALD1-219ENST00000480638 OR7G3Q8NG95 312 aa4□□□□□ -1.77
CALD1-219ENST00000480638 TYMSOSQ8TAI1 123 aa4□□□□□ -1.77
CALD1-219ENST00000480638 ZNF559Q9BR84 538 aa4□□□□□ -1.77
CALD1-219ENST00000480638 TMEM206Q9H813 350 aa4□□□□□ -1.77
CALD1-219ENST00000480638 SP140LQ9H930 580 aa4□□□□□ -1.77
CALD1-219ENST00000480638 MARCH7Q9H992 704 aa4□□□□□ -1.77
CALD1-219ENST00000480638 TMEM161AQ9NX61 479 aa4□□□□□ -1.77
CALD1-219ENST00000480638 ZNF319Q9P2F9 582 aa4□□□□□ -1.77
CALD1-219ENST00000480638 FBXL5Q9UKA1 691 aa4□□□□□ -1.77
CALD1-219ENST00000480638 A0A087WWV3 80 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 A0A087X0K7 114 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 BCLAF3A2AJT9 711 aaKnown RBP3.99□□□□□ -1.77
CALD1-219ENST00000480638 TRIM49BA6NDI0 452 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 GLCEO94923 617 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 SEMA4FO95754 770 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 MT-ND1P03886 318 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 HCKP08631 526 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 C8orf89P0DMQ9 161 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 ODC1P11926 461 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 SKILP12757 684 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 GLULP15104 373 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 MAGEB1P43366 347 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 GBP6Q6ZN66 633 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 NUFIP2Q7Z417 695 aaKnown RBP3.99□□□□□ -1.77
CALD1-219ENST00000480638 SH2D6Q7Z4S9 175 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 TUSC5Q8IXB3 177 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 ABCA7Q8IZY2 2146 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 GOT1L1Q8NHS2 421 aaPredicted RBP3.99□□□□□ -1.77
CALD1-219ENST00000480638 PCNPQ8WW12 178 aaKnown RBP3.99□□□□□ -1.77
CALD1-219ENST00000480638 TEKT1Q969V4 418 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 RUNDC3BQ96NL0 473 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 ANKRD27Q96NW4 1050 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 ERGIC2Q96RQ1 377 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 UTP14AQ9BVJ6 771 aaKnown RBP3.99□□□□□ -1.77
CALD1-219ENST00000480638 LRRC2Q9BYS8 371 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 LIME1Q9H400 295 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 ZWILCHQ9H900 591 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 SH3GLB2Q9NR46 395 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 MIS18AQ9NYP9 233 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 ZNF581Q9P0T4 197 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 GON4LQ3T8J9 2241 aa3.99□□□□□ -1.77
CALD1-219ENST00000480638 IGLV3-10A0A075B6K4 115 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 MAGEB16A2A368 324 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 A4D1N5 150 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 OR5H15A6NDH6 313 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 ZNF724A8MTY0 619 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 PSMA7O14818 248 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 STX6O43752 255 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 ATP9AO75110 1047 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 LYNP07948 512 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 OR1D2P34982 312 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 SLC1A6P48664 564 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 FHITP49789 147 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 CCL14Q16627 93 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 TYSND1Q2T9J0 566 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 TMEM44Q2T9K0 475 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 ZNF506Q5JVG8 444 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 CCDC158Q5M9N0 1113 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 HECTD3Q5T447 861 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 LRRC38Q5VT99 294 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 ZNF730Q6ZMV8 503 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 LRRC49Q8IUZ0 686 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 CLEC1AQ8NC01 280 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 ZPLD1Q8TCW7 415 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 ITLN1Q8WWA0 313 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 GRPEL1Q9HAV7 217 aa3.98□□□□□ -1.77
CALD1-219ENST00000480638 DNAJC17Q9NVM6 304 aaKnown RBP3.98□□□□□ -1.77
CALD1-219ENST00000480638 ZNF107Q9UII5 783 aaPredicted RBP3.98□□□□□ -1.77
CALD1-219ENST00000480638 TMCO5BA8MYB1 307 aa3.97□□□□□ -1.77
CALD1-219ENST00000480638 PHOX2AO14813 284 aa3.97□□□□□ -1.77
CALD1-219ENST00000480638 SYT7O43581 403 aa3.97□□□□□ -1.77
CALD1-219ENST00000480638 FRAT2O75474 233 aaPredicted RBP3.97□□□□□ -1.77
CALD1-219ENST00000480638 ST8SIA6P61647 398 aa3.97□□□□□ -1.77
CALD1-219ENST00000480638 ROR1Q01973 937 aa3.97□□□□□ -1.77
CALD1-219ENST00000480638 RNLSQ5VYX0 342 aa3.97□□□□□ -1.77
CALD1-219ENST00000480638 ALKBH5Q6P6C2 394 aaKnown RBP3.97□□□□□ -1.77
CALD1-219ENST00000480638 ZNRF1Q8ND25 227 aa3.97□□□□□ -1.77
CALD1-219ENST00000480638 CDKN2AIPNLQ96HQ2 116 aa3.97□□□□□ -1.77
CALD1-219ENST00000480638 ACPTQ9BZG2 426 aa3.97□□□□□ -1.77
CALD1-219ENST00000480638 CLEC5AQ9NY25 188 aa3.97□□□□□ -1.77
CALD1-219ENST00000480638 MGAT4AQ9UM21 535 aa3.97□□□□□ -1.77
CALD1-219ENST00000480638 ADAMTS9Q9P2N4 1935 aa3.97□□□□□ -1.77
CALD1-219ENST00000480638 UMODL1Q5DID0 1318 aa3.96□□□□□ -1.77
CALD1-219ENST00000480638 ATP6AP2A0A1C7CYW4 349 aa3.96□□□□□ -1.78
CALD1-219ENST00000480638 H0Y626 953 aa3.96□□□□□ -1.78
CALD1-219ENST00000480638 CCSO14618 274 aa3.96□□□□□ -1.78
CALD1-219ENST00000480638 CHUKO15111 745 aa3.96□□□□□ -1.78
CALD1-219ENST00000480638 VENTXO95231 258 aa3.96□□□□□ -1.78
CALD1-219ENST00000480638 FHP07954 510 aa3.96□□□□□ -1.78
CALD1-219ENST00000480638 SPRP35270 261 aaPredicted RBP3.96□□□□□ -1.78
CALD1-219ENST00000480638 ELK3P41970 407 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms