RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 PTX3P26022 381 aaPredicted RBP14.02□□□□□ -0.17
TDP2-205ENST00000480495 EEF1DP29692 281 aaKnown RBP14.02□□□□□ -0.17
TDP2-205ENST00000480495 CYB561P49447 251 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 HLCSP50747 726 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 RAP1GDS1P52306 607 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 STX4Q12846 297 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 DDX39BQ13838 428 aaKnown RBP14.02□□□□□ -0.17
TDP2-205ENST00000480495 SPINK14Q6IE38 97 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 OR4C11Q6IEV9 310 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 SLC25A25Q6KCM7 469 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 GFRALQ6UXV0 394 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 TRMT10CQ7L0Y3 403 aaKnown RBP14.02□□□□□ -0.17
TDP2-205ENST00000480495 CLNKQ7Z7G1 428 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 PTGR2Q8N8N7 351 aaPredicted RBP14.02□□□□□ -0.17
TDP2-205ENST00000480495 FAM98AQ8NCA5 519 aaKnown RBP14.02□□□□□ -0.17
TDP2-205ENST00000480495 DAZLQ92904 295 aaKnown RBP14.02□□□□□ -0.17
TDP2-205ENST00000480495 NCLNQ969V3 563 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 SCYL1Q96KG9 808 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 MAPKAP1Q9BPZ7 522 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 ALOXE3Q9BYJ1 711 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 OR51B5Q9H339 312 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 KLHL1Q9NR64 748 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 ZNF358Q9NW07 568 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 MS4A12Q9NXJ0 267 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 PSD3Q9NYI0 1048 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 VTI1BQ9UEU0 232 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 NFU1Q9UMS0 254 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 CLCA3PQ9Y6N3 262 aa14.02□□□□□ -0.17
TDP2-205ENST00000480495 SPTAN1Q13813 2472 aaKnown RBP14.01□□□□□ -0.17
TDP2-205ENST00000480495 A0A1B0GUH1 482 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 EXOC1LA0A1B0GW35 172 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 ASPDHA6ND91 283 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 SMIM24O75264 130 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 SH3BGRLO75368 114 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 SLC25A12O75746 678 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 SIX3O95343 332 aaPredicted RBP14.01□□□□□ -0.17
TDP2-205ENST00000480495 IFNA16P05015 189 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 CPN2P22792 545 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 MST1P26927 711 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 PPP2R1BP30154 601 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 GPR143P51810 404 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 KCNK10P57789 538 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 CPSF6Q16630 551 aaKnown RBP eCLIP14.01□□□□□ -0.17
TDP2-205ENST00000480495 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.01□□□□□ -0.17
TDP2-205ENST00000480495 CNPY4Q8N129 248 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 ZCCHC7Q8N3Z6 543 aaKnown RBP14.01□□□□□ -0.17
TDP2-205ENST00000480495 MORN4Q8NDC4 146 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 OR14A16Q8NHC5 309 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 UHMK1Q8TAS1 419 aaKnown RBP14.01□□□□□ -0.17
TDP2-205ENST00000480495 TMEM125Q96AQ2 219 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 PHF21BQ96EK2 531 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 MTERF1Q99551 399 aaKnown RBP14.01□□□□□ -0.17
TDP2-205ENST00000480495 MRPL57Q9BQC6 102 aaKnown RBP14.01□□□□□ -0.17
TDP2-205ENST00000480495 HES7Q9BYE0 225 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 MRPL46Q9H2W6 279 aaKnown RBP14.01□□□□□ -0.17
TDP2-205ENST00000480495 XPR1Q9UBH6 696 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 SEC14L3Q9UDX4 400 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 PHF11Q9UIL8 331 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 FBXW2Q9UKT8 454 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 PPT2Q9UMR5 302 aa14.01□□□□□ -0.17
TDP2-205ENST00000480495 CYSRT1A8MQ03 144 aa14□□□□□ -0.17
TDP2-205ENST00000480495 FOXE1O00358 373 aaPredicted RBP14□□□□□ -0.17
TDP2-205ENST00000480495 SAP18O00422 153 aaKnown RBP14□□□□□ -0.17
TDP2-205ENST00000480495 PLPP1O14494 284 aa14□□□□□ -0.17
TDP2-205ENST00000480495 LRRTM2O43300 516 aa14□□□□□ -0.17
TDP2-205ENST00000480495 ZFAND5O76080 213 aa14□□□□□ -0.17
TDP2-205ENST00000480495 UNC5CO95185 931 aa14□□□□□ -0.17
TDP2-205ENST00000480495 CLDN9O95484 217 aa14□□□□□ -0.17
TDP2-205ENST00000480495 TLX1P31314 330 aaPredicted RBP14□□□□□ -0.17
TDP2-205ENST00000480495 ST13P50502 369 aaKnown RBP14□□□□□ -0.17
TDP2-205ENST00000480495 RPS13P62277 151 aaKnown RBP14□□□□□ -0.17
TDP2-205ENST00000480495 PMP22Q01453 160 aa14□□□□□ -0.17
TDP2-205ENST00000480495 RBPJQ06330 500 aa14□□□□□ -0.17
TDP2-205ENST00000480495 SLAMF1Q13291 335 aa14□□□□□ -0.17
TDP2-205ENST00000480495 BIKQ13323 160 aa14□□□□□ -0.17
TDP2-205ENST00000480495 CUL3Q13618 768 aa14□□□□□ -0.17
TDP2-205ENST00000480495 C10orf62Q5T681 223 aaPredicted RBP14□□□□□ -0.17
TDP2-205ENST00000480495 ZNF468Q5VIY5 522 aaPredicted RBP14□□□□□ -0.17
TDP2-205ENST00000480495 GALNTL5Q7Z4T8 443 aa14□□□□□ -0.17
TDP2-205ENST00000480495 RELTQ969Z4 430 aa14□□□□□ -0.17
TDP2-205ENST00000480495 ATP6V1E2Q96A05 226 aa14□□□□□ -0.17
TDP2-205ENST00000480495 MTBPQ96DY7 904 aa14□□□□□ -0.17
TDP2-205ENST00000480495 NTMT1Q9BV86 223 aa14□□□□□ -0.17
TDP2-205ENST00000480495 NOL11Q9H8H0 719 aaKnown RBP14□□□□□ -0.17
TDP2-205ENST00000480495 ZNF223Q9UK11 482 aaPredicted RBP14□□□□□ -0.17
TDP2-205ENST00000480495 PCTPQ9UKL6 214 aa14□□□□□ -0.17
TDP2-205ENST00000480495 RNF11Q9Y3C5 154 aa14□□□□□ -0.17
TDP2-205ENST00000480495 SPTBN1Q01082 2364 aaKnown RBP14□□□□□ -0.17
TDP2-205ENST00000480495 DOPEY1Q5JWR5 2465 aa13.99□□□□□ -0.17
TDP2-205ENST00000480495 OR7A17O14581 309 aa13.99□□□□□ -0.17
TDP2-205ENST00000480495 NME2P1O60361 137 aa13.99□□□□□ -0.17
TDP2-205ENST00000480495 LDB3O75112 727 aa13.99□□□□□ -0.17
TDP2-205ENST00000480495 NME2P22392 152 aa13.99□□□□□ -0.17
TDP2-205ENST00000480495 CCNG1P51959 295 aa13.99□□□□□ -0.17
TDP2-205ENST00000480495 ALDH6A1Q02252 535 aaKnown RBP13.99□□□□□ -0.17
TDP2-205ENST00000480495 ZRSR2Q15696 482 aaKnown RBP13.99□□□□□ -0.17
TDP2-205ENST00000480495 MAPKAPK3Q16644 382 aa13.99□□□□□ -0.17
TDP2-205ENST00000480495 KRTCAP3Q53RY4 240 aa13.99□□□□□ -0.17
TDP2-205ENST00000480495 ADGRD1Q6QNK2 874 aa13.99□□□□□ -0.17
TDP2-205ENST00000480495 TIFABQ6ZNK6 161 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms