RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 GFYI3L273 518 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 DLX3O60479 287 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 PROSCO94903 275 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 HPNP05981 417 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 RNH1P13489 461 aaKnown RBP10.77□□□□□ -0.69
USP11-208ENST00000480104 ALOX12P18054 663 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 USF1P22415 310 aaPredicted RBP10.77□□□□□ -0.69
USP11-208ENST00000480104 SLC6A12P48065 614 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 DSCR9P59020 149 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 LSM11P83369 360 aaKnown RBP eCLIP10.77□□□□□ -0.69
USP11-208ENST00000480104 BMPR2Q13873 1038 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 SPARCL1Q14515 664 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 ARHGAP19Q14CB8 494 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 THEMIS2Q5TEJ8 643 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 E4F1Q66K89 784 aaPredicted RBP10.77□□□□□ -0.69
USP11-208ENST00000480104 LYPD8Q6UX82 237 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 SEZ6L2Q6UXD5 910 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 WFDC8Q8IUA0 241 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 HSCBQ8IWL3 235 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 SCUBE1Q8IWY4 988 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 ZNF525Q8N782 197 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 STYXQ8WUJ0 223 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 NEUROG1Q92886 237 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 PGM2Q96G03 612 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 KRT12Q99456 494 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 PKP4Q99569 1192 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 TBL1YQ9BQ87 522 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 G6PC3Q9BUM1 346 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 KLHL4Q9C0H6 718 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 UBQLN3Q9H347 655 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 OCEL1Q9H607 264 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 AIPL1Q9NZN9 384 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 TRHDEQ9UKU6 1024 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 SH2B3Q9UQQ2 575 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 MMACHCQ9Y4U1 282 aa10.77□□□□□ -0.69
USP11-208ENST00000480104 A0A0A6YYJ9 748 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 E7ENX8 843 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 SLCO1B7G3V0H7 640 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 CLOCKO15516 846 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 LCMT2O60294 686 aaKnown RBP10.76□□□□□ -0.69
USP11-208ENST00000480104 TRIM3O75382 744 aaPredicted RBP10.76□□□□□ -0.69
USP11-208ENST00000480104 SLC16A8O95907 504 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 TPM2P07951 284 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 ZNF888P0CJ79 500 aaPredicted RBP10.76□□□□□ -0.69
USP11-208ENST00000480104 PSMB4P28070 264 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 PTPN6P29350 595 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 NAGLUP54802 743 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 SKP1P63208 163 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 RNF4P78317 190 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 SRYQ05066 204 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 POU6F1Q14863 301 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 NRF1Q16656 503 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 PGGHGQ32M88 737 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 DPCR1Q3MIW9 517 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 CAPN13Q6MZZ7 669 aaPredicted RBP10.76□□□□□ -0.69
USP11-208ENST00000480104 SHISA2Q6UWI4 295 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 KIAA1328Q86T90 577 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 GRAMD2AQ8IUY3 354 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 FAM13CQ8NE31 585 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 OR10G3Q8NGC4 313 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 GABPB2Q8TAK5 448 aaPredicted RBP10.76□□□□□ -0.69
USP11-208ENST00000480104 ZNF480Q8WV37 535 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 SPACA9Q96E40 222 aaPredicted RBP10.76□□□□□ -0.69
USP11-208ENST00000480104 QKIQ96PU8 341 aaKnown RBP eCLIP10.76□□□□□ -0.69
USP11-208ENST00000480104 UCN2Q96RP3 112 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 TRAF4Q9BUZ4 470 aaPredicted RBP10.76□□□□□ -0.69
USP11-208ENST00000480104 NTMT1Q9BV86 223 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 ZNF747Q9BV97 191 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 ADAP2Q9NPF8 381 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 EIF2B3Q9NR50 452 aaKnown RBP10.76□□□□□ -0.69
USP11-208ENST00000480104 TMEM184CQ9NVA4 438 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 CNOT11Q9UKZ1 510 aaKnown RBP10.76□□□□□ -0.69
USP11-208ENST00000480104 CLDN16Q9Y5I7 305 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 CHCHD2Q9Y6H1 151 aaPredicted RBP10.76□□□□□ -0.69
USP11-208ENST00000480104 NINQ8N4C6 2090 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 CADP27708 2225 aa10.76□□□□□ -0.69
USP11-208ENST00000480104 NDUFS4O43181 175 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 CEP104O60308 925 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 STK10O94804 968 aaKnown RBP10.75□□□□□ -0.69
USP11-208ENST00000480104 TGM6O95932 706 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 FTCDO95954 541 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 CD8AP01732 235 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 NR2C2P49116 596 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 TBL3Q12788 808 aaKnown RBP10.75□□□□□ -0.69
USP11-208ENST00000480104 ASPHQ12797 758 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 SEMA3AQ14563 771 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 TOMM20Q15388 145 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 PIGGQ5H8A4 983 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 VSIG1Q86XK7 387 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 FAM216AQ8WUB2 273 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 KAT2AQ92830 837 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 REPS1Q96D71 796 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 C11orf24Q96F05 449 aaPredicted RBP10.75□□□□□ -0.69
USP11-208ENST00000480104 OR8D2Q9GZM6 311 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 ALG2Q9H553 416 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 ARNT2Q9HBZ2 717 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 CNIH4Q9P003 139 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 FEZ2Q9UHY8 353 aaPredicted RBP10.75□□□□□ -0.69
USP11-208ENST00000480104 RNF115Q9Y4L5 304 aa10.75□□□□□ -0.69
USP11-208ENST00000480104 LRRC53A6NM62 1247 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms