RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 ARHGAP10A1A4S6 786 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 POC1B-GALNT4F8VUJ3 575 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 HNRNPRO43390 633 aaKnown RBP13.38□□□□□ -0.27
ATG4B-218ENST00000479554 NME2P1O60361 137 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 PRAMEF4O60810 478 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 WISP2O76076 250 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 C1QAP02745 245 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 ZNF24P17028 368 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 NME2P22392 152 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 CERS1P27544 350 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 TRHRP34981 398 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-218ENST00000479554 HLCSP50747 726 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 HNRNPFP52597 415 aaKnown RBP13.38□□□□□ -0.27
ATG4B-218ENST00000479554 MTTPP55157 894 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 PPP2R2AP63151 447 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 IRF8Q02556 426 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 ART3Q13508 389 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 LAPTM5Q13571 262 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 RCN2Q14257 317 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 C3AR1Q16581 482 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 HIST2H2ACQ16777 129 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-218ENST00000479554 PRAMEF9Q5VWM5 478 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 HIST2H2AA3Q6FI13 130 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 ADNP2Q6IQ32 1131 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 RPTNQ6XPR3 784 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 LRRC70Q7Z2Q7 622 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 CMC1Q7Z7K0 106 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 MRGPRGQ86SM5 289 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 ZNF595Q8IYB9 648 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 ZNF808Q8N4W9 903 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-218ENST00000479554 TMEM52Q8NDY8 209 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 MARVELD3Q96A59 401 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 WDR34Q96EX3 536 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 VMP1Q96GC9 406 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 SERINC2Q96SA4 455 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 ALG9Q9H6U8 611 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 NUDT4Q9NZJ9 180 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 PSMC3IPQ9P2W1 217 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-218ENST00000479554 TINAGQ9UJW2 476 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 PTBP2Q9UKA9 531 aaKnown RBP13.38□□□□□ -0.27
ATG4B-218ENST00000479554 FBXW2Q9UKT8 454 aa13.38□□□□□ -0.27
ATG4B-218ENST00000479554 SYNDIG1LA6NDD5 238 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 SUPT3HB4E1H0 165 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 TGFBR3LH3BV60 316 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 SUPT3HO75486 399 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 FAM155BO75949 473 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 TBX6O95947 436 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-218ENST00000479554 SLC35E2BP0CK96 405 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 ESRRAP11474 423 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-218ENST00000479554 TFEBP19484 476 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 CD22P20273 847 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 GCAP28676 217 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 PPP2R1BP30154 601 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 GMPRP36959 345 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 MSH2P43246 934 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 KCNC1P48547 511 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 LIM2P55344 173 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 CHIT1Q13231 466 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 NAB1Q13506 487 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 ABHD17CQ6PCB6 329 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 CLNKQ7Z7G1 428 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 TBC1D1Q86TI0 1168 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-218ENST00000479554 ZNF227Q86WZ6 799 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 SIAH3Q8IW03 269 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 ARMC10Q8N2F6 343 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 GHDCQ8N2G8 530 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 CPSF7Q8N684 471 aaKnown RBP13.37□□□□□ -0.27
ATG4B-218ENST00000479554 STAG3L4Q8TBR4 150 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 NCLNQ969V3 563 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 KCNC2Q96PR1 638 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 CSF3RQ99062 836 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 CD244Q9BZW8 370 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 TRIM45Q9H8W5 580 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-218ENST00000479554 NMRAL1Q9HBL8 299 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 ADAP2Q9NPF8 381 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 PSD3Q9NYI0 1048 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 ZNF490Q9ULM2 529 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-218ENST00000479554 DAPP1Q9UN19 280 aa13.37□□□□□ -0.27
ATG4B-218ENST00000479554 KLF13Q9Y2Y9 288 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-218ENST00000479554 KLF2Q9Y5W3 355 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-218ENST00000479554 ASNA1O43681 348 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 KERAO60938 352 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 ITGA10O75578 1167 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 IFNA16P05015 189 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 EPORP19235 508 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 CRABP2P29373 138 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 EFTUD2Q15029 972 aaKnown RBP eCLIP13.36□□□□□ -0.275e-8■■■□□ 17.8
ATG4B-218ENST00000479554 TBCCQ15814 346 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 SP5Q6BEB4 398 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-218ENST00000479554 ADGRD1Q6QNK2 874 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 Q6ZPB1 254 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-218ENST00000479554 TICAM1Q8IUC6 712 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 SPPL2CQ8IUH8 684 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 CNPY4Q8N129 248 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 CYP4Z2PQ8N1L4 340 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 TMEM156Q8N614 296 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 POGLUT1Q8NBL1 392 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 SRFBP1Q8NEF9 429 aaKnown RBP13.36□□□□□ -0.27
ATG4B-218ENST00000479554 F2RL3Q96RI0 385 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 PAFAH2Q99487 392 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms