RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 CLNKQ7Z7G1 428 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 KIF18BQ86Y91 864 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 KRTAP1-3Q8IUG1 177 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 LRRN4CLQ8ND94 238 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 MORN4Q8NDC4 146 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 TMEM52Q8NDY8 209 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 SPATA3Q8NHX4 192 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 DAZLQ92904 295 aaKnown RBP15.86■□□□□ 0.13
VIM-204ENST00000478746 FBXL8Q96CD0 374 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 LINGO1Q96FE5 620 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 CAPZA3Q96KX2 299 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 NDNQ99608 321 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 AICDAQ9GZX7 198 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 PELI2Q9HAT8 420 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 BEX4Q9NWD9 120 aaPredicted RBP15.86■□□□□ 0.13
VIM-204ENST00000478746 ZNF629Q9UEG4 869 aaPredicted RBP15.86■□□□□ 0.13
VIM-204ENST00000478746 MRPS33Q9Y291 106 aaKnown RBP15.86■□□□□ 0.13
VIM-204ENST00000478746 DYRK1BQ9Y463 629 aa15.86■□□□□ 0.13
VIM-204ENST00000478746 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.86■□□□□ 0.13
VIM-204ENST00000478746 A0A0G2JN53 185 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 ARHGEF9O43307 516 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 NRDCO43847 1150 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 GUCA1CO95843 209 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 CD53P19397 219 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 CEACAM8P31997 349 aaPredicted RBP15.85■□□□□ 0.13
VIM-204ENST00000478746 PIGAP37287 484 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 RAB38P57729 211 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 STXBP1P61764 594 aaKnown RBP15.85■□□□□ 0.13
VIM-204ENST00000478746 RNF4P78317 190 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 TRIP13Q15645 432 aaPredicted RBP15.85■□□□□ 0.13
VIM-204ENST00000478746 NXPE4Q6UWF7 544 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 MAATS1Q7Z4T9 603 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 ZNF595Q8IYB9 648 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 GPATCH11Q8N954 259 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 NAXEQ8NCW5 288 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 TNIP2Q8NFZ5 429 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 OR5L2Q8NGL0 311 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 OR8K3Q8NH51 312 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 LINC01560Q8TB33 94 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 PTPMT1Q8WUK0 201 aaPredicted RBP15.85■□□□□ 0.13
VIM-204ENST00000478746 BAG1Q99933 345 aaPredicted RBP15.85■□□□□ 0.13
VIM-204ENST00000478746 OR8D2Q9GZM6 311 aa15.85■□□□□ 0.13
VIM-204ENST00000478746 MYOCOSA0A1B0GUC4 107 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 SYNDIG1LA6NDD5 238 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 AHRRA9YTQ3 701 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 ZNF354AO60765 605 aaPredicted RBP15.84■□□□□ 0.13
VIM-204ENST00000478746 EPPINO95925 133 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 IL2RAP01589 272 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 TNNI3P19429 210 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 PCSK6P29122 969 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 ZNF75DP51815 510 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 HSP90AA5PQ58FG0 334 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 SLC22A10Q63ZE4 541 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 GAS2L3Q86XJ1 694 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 RNF10Q8N5U6 811 aaKnown RBP15.84■□□□□ 0.13
VIM-204ENST00000478746 ZNF321PQ8N8H1 164 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 FAM47BQ8NA70 645 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 OR14A16Q8NHC5 309 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 NEIL3Q8TAT5 605 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 GAL3ST3Q96A11 431 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 YIPF4Q9BSR8 244 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 DESI2Q9BSY9 194 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 ALOXE3Q9BYJ1 711 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 RBSNQ9H1K0 784 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 IARS2Q9NSE4 1012 aaKnown RBP15.84■□□□□ 0.13
VIM-204ENST00000478746 TRMT1Q9NXH9 659 aaKnown RBP15.84■□□□□ 0.13
VIM-204ENST00000478746 VTI1BQ9UEU0 232 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 ZKSCAN5Q9Y2L8 839 aa15.84■□□□□ 0.13
VIM-204ENST00000478746 COL6A5A8TX70 2615 aa15.83■□□□□ 0.13
VIM-204ENST00000478746 CLCA1A8K7I4 914 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 B3GALT2O43825 422 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 CTNSO60931 367 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 GOSR1O95249 250 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 RFPL3SP0C7P2 107 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 MLNP12872 115 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 TIMP3P35625 211 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 MAGEA6P43360 314 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 VPS41P49754 854 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 CDKN2DP55273 166 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 IL2P60568 153 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 ANKRD22Q5VYY1 191 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 POMZP3Q6PJE2 187 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 CXXC5Q7LFL8 322 aaKnown RBP15.83■□□□□ 0.12
VIM-204ENST00000478746 TMPRSS11BQ86T26 416 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 THOC6Q86W42 341 aaKnown RBP15.83■□□□□ 0.12
VIM-204ENST00000478746 LIX1Q8N485 282 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 FAM167BQ9BTA0 163 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 EPB41L4BQ9H329 900 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 ZFP64Q9NPA5 681 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 ACKR4Q9NPB9 350 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 BOKQ9UMX3 212 aaPredicted RBP15.83■□□□□ 0.12
VIM-204ENST00000478746 KCNE2Q9Y6J6 123 aa15.83■□□□□ 0.12
VIM-204ENST00000478746 NINQ8N4C6 2090 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 A0A088AWK7 358 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 CYR61O00622 381 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 ERI3O43414 337 aaKnown RBP15.82■□□□□ 0.12
VIM-204ENST00000478746 H2AFYO75367 372 aaKnown RBP15.82■□□□□ 0.12
VIM-204ENST00000478746 ZNF10P21506 573 aaPredicted RBP15.82■□□□□ 0.12
VIM-204ENST00000478746 TRPC1P48995 793 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 WNT3P56703 355 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms