RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CAPN6Q9Y6Q1 641 aa18.68■□□□□ 0.58
PDLIM1-202ENST00000477757 ZCWPW2A0A1B0GU75 182 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 HRGP04196 525 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 TIMP3P35625 211 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 AP1S2P56377 157 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 RAB38P57729 211 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 TIAL1Q01085 375 aaKnown RBP eCLIP18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 SIX1Q15475 284 aaPredicted RBP18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 CCNG2Q16589 344 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 UGT3A1Q6NUS8 523 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 LACC1Q8IV20 430 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 ZNF595Q8IYB9 648 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 CIARTQ8N365 385 aaPredicted RBP18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 MORN4Q8NDC4 146 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 SIMC1Q8NDZ2 872 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 DAZLQ92904 295 aaKnown RBP18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 GAL3ST3Q96A11 431 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 CAPZA3Q96KX2 299 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 YIPF4Q9BSR8 244 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 NPLQ9BXD5 320 aaPredicted RBP18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 SLC6A15Q9H2J7 730 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 FBXO5Q9UKT4 447 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 MRPS33Q9Y291 106 aaKnown RBP18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 MPDZO75970 2070 aa18.67■□□□□ 0.58
PDLIM1-202ENST00000477757 A0A1W2PPR1 153 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 H7C1Q1 480 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 NRDCO43847 1150 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 EPPINO95925 133 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 PIGAP37287 484 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 RNF4P78317 190 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 BTN3A2P78410 334 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 RUNX2Q13950 521 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 ADGRD1Q6QNK2 874 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 CLNKQ7Z7G1 428 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 LRRC25Q8N386 305 aaPredicted RBP18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 ZNF321PQ8N8H1 164 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 GPATCH11Q8N954 259 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 FAM47BQ8NA70 645 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 OR14A16Q8NHC5 309 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 NEIL3Q8TAT5 605 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 LINC01560Q8TB33 94 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 PTPMT1Q8WUK0 201 aaPredicted RBP18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 ATL1Q8WXF7 558 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 FBXL8Q96CD0 374 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 LINGO1Q96FE5 620 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 AIF1LQ9BQI0 150 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 SH2D2AQ9NP31 389 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 ACKR4Q9NPB9 350 aa18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 BOKQ9UMX3 212 aaPredicted RBP18.66■□□□□ 0.58
PDLIM1-202ENST00000477757 PABPN1LA6NDY0 278 aaKnown RBP18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 LRRC3CA6NJW4 275 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 KDM4EB2RXH2 506 aaPredicted RBP18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 HAUS5O94927 633 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 IFNA16P05015 189 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 RFPL3SP0C7P2 107 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 MAGEA6P43360 314 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 ZNF136P52737 540 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 WNT3P56703 355 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 STXBP1P61764 594 aaKnown RBP18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 SARNPP82979 210 aaKnown RBP18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 PAQR3Q6TCH7 311 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 GSTA5Q7RTV2 222 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 CAND1Q86VP6 1230 aaKnown RBP18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 LRRC75A-AS1Q8N1F1 130 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 OR5L2Q8NGL0 311 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 CALML6Q8TD86 181 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 FAR2Q96K12 515 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 NDNQ99608 321 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 OR8D2Q9GZM6 311 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 ZFP64Q9NPA5 681 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 QPCTLQ9NXS2 382 aa18.65■□□□□ 0.58
PDLIM1-202ENST00000477757 MAGEB16A2A368 324 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 AHRRA9YTQ3 701 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 IL2RAP01589 272 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 KCNJ2P63252 427 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 KIF5AQ12840 1032 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 RBBP5Q15291 538 aaKnown RBP18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 POU4F3Q15319 338 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 TMPRSS11BQ86T26 416 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 RNF214Q8ND24 703 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 ZNF592Q92610 1267 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 HSPBAP1Q96EW2 488 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 C20orf96Q9NUD7 363 aaPredicted RBP18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 TAS2R13Q9NYV9 303 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 ADAM21Q9UKJ8 722 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 DYRK1BQ9Y463 629 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 NCKAP5O14513 1909 aa18.64■□□□□ 0.57
PDLIM1-202ENST00000477757 A0A0G2JN53 185 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 INAFM1C9JVW0 142 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 CYR61O00622 381 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 ERI3O43414 337 aaKnown RBP18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 SAT1P21673 171 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 HNRNPH1P31943 449 aaKnown RBP18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 PPP2R2BQ00005 443 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 MPEG1Q2M385 716 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 ZNF791Q3KP31 576 aaPredicted RBP18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 SLC22A10Q63ZE4 541 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 NXPE4Q6UWF7 544 aa18.63■□□□□ 0.57
PDLIM1-202ENST00000477757 P3H2Q8IVL5 708 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms