RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 C21orf140B9A014 251 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 PYCARD-AS1I3L0S3 204 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 J3QKU1 62 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 CNOT3O75175 753 aaKnown RBP14.45□□□□□ -0.1
SEC13-215ENST00000477547 ALBP02768 609 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 RAB40ALP0C0E4 278 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 FAM58BPP0C7Q3 252 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 TROVE2P10155 538 aaKnown RBP eCLIP14.45□□□□□ -0.1
SEC13-215ENST00000477547 NR2F6P10588 404 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 MAPK1P28482 360 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 EPHA3P29320 983 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 LSP1P33241 339 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 NKG7Q16617 165 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 SLC9B1Q4ZJI4 515 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 MFSD4BQ5TF39 518 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 MRM1Q6IN84 353 aaKnown RBP14.45□□□□□ -0.1
SEC13-215ENST00000477547 NOXRED1Q6NXP6 359 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 MRPL14Q6P1L8 145 aaKnown RBP14.45□□□□□ -0.1
SEC13-215ENST00000477547 GALNT18Q6P9A2 607 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 PCSK4Q6UW60 755 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 SHISA5Q8N114 240 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 STT3BQ8TCJ2 826 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 TBC1D20Q96BZ9 403 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 MIEF2Q96C03 454 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 C11orf24Q96F05 449 aaPredicted RBP14.45□□□□□ -0.1
SEC13-215ENST00000477547 CHMP6Q96FZ7 201 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 FCRL1Q96LA6 429 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 OR1F2PQ96R84 312 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 TRIM55Q9BYV6 548 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 WDR55Q9H6Y2 383 aaPredicted RBP14.45□□□□□ -0.1
SEC13-215ENST00000477547 WDR54Q9H977 334 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 SIRT5Q9NXA8 310 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 TEX10Q9NXF1 929 aaPredicted RBP14.45□□□□□ -0.1
SEC13-215ENST00000477547 DLGAP4Q9Y2H0 992 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 TMED5Q9Y3A6 229 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 MGAQ8IWI9 3026 aa14.45□□□□□ -0.1
SEC13-215ENST00000477547 ZNF195O14628 629 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 TERTO14746 1132 aaKnown RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 JRKO75564 520 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 CDC123O75794 336 aaPredicted RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 AIFM1O95831 613 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 FHP07954 510 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 ANXA4P09525 319 aaPredicted RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 ZGLP1P0C6A0 271 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 PRR35P0CG20 571 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 LIFP15018 202 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 CPN2P22792 545 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 JAK1P23458 1154 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 BUD31P41223 144 aaPredicted RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 FOLR3P41439 243 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 AQP5P55064 265 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 FOXL2P58012 376 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 RPS18P62269 152 aaKnown RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 RPS15P62841 145 aaKnown RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 MAD2L1Q13257 205 aaPredicted RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 KIAA0040Q15053 153 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 MINDY4Q4G0A6 757 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 RFTN2Q52LD8 501 aaPredicted RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 VWA2Q5GFL6 755 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 C6orf136Q5SQH8 315 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 NXNQ6DKJ4 435 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 LRRC69Q6ZNQ3 347 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 SHISA6Q6ZSJ9 500 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 ACAD11Q709F0 780 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 GPR180Q86V85 440 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 LSM14AQ8ND56 463 aaKnown RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 MAELQ96JY0 434 aaKnown RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 ZNF317Q96PQ6 595 aaPredicted RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 SPSB2Q99619 263 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 SIKE1Q9BRV8 207 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 ACTL8Q9H568 366 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 SOX17Q9H6I2 414 aaPredicted RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 AKTIPQ9H8T0 292 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 MS4A12Q9NXJ0 267 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 MRPS33Q9Y291 106 aaKnown RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 PTRH2Q9Y3E5 179 aaKnown RBP14.44□□□□□ -0.1
SEC13-215ENST00000477547 ATG4BQ9Y4P1 393 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 ATMQ13315 3056 aa14.44□□□□□ -0.1
SEC13-215ENST00000477547 GUCY1B2O75343 617 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 PRKRAO75569 313 aaKnown RBP14.43□□□□□ -0.1
SEC13-215ENST00000477547 BMP10O95393 424 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 TGDSO95455 350 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 IL3P08700 152 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 ACPPP15309 386 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 LBPP18428 481 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 SDC1P18827 310 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 IL10P22301 178 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 ERVK-8P63133 956 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 FAM69BQ5VUD6 431 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 CGB2Q6NT52 195 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 EPGNQ6UW88 154 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 OR2Y1Q8NGV0 311 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 RFWD2Q8NHY2 731 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 CRB3Q9BUF7 120 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 TGIF2Q9GZN2 237 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 NSRP1Q9H0G5 558 aaKnown RBP14.43□□□□□ -0.1
SEC13-215ENST00000477547 WDR41Q9HAD4 459 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 MYNNQ9NPC7 610 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 NOP53Q9NZM5 478 aaKnown RBP14.43□□□□□ -0.1
SEC13-215ENST00000477547 KCMF1Q9P0J7 381 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms