RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 MEDAGQ5VYS4 303 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 PRSS48Q7RTY5 328 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 ALDH16A1Q8IZ83 802 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 KLHL36Q8N4N3 616 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 TMIEQ8NEW7 156 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 ZNF480Q8WV37 535 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 WBP2Q969T9 261 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 AREL1O15033 823 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 PRAMEF12O95522 483 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 ASGR2P07307 311 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 RAB14P61106 215 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 RPS26P62854 115 aaKnown RBP14□□□□□ -0.17
HDAC6-220ENST00000477528 CHMP1BQ7LBR1 199 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 NRROSQ86YC3 692 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 CENPSQ8N2Z9 138 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 SLC5A8Q8N695 610 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 RASGEF1AQ8N9B8 481 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 OR5AR1Q8NGP9 310 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 FNDC8Q8TC99 324 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 TRUB1Q8WWH5 349 aaKnown RBP14□□□□□ -0.17
HDAC6-220ENST00000477528 LGALS12Q96DT0 336 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 EPYCQ99645 322 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 BCL7BQ9BQE9 202 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 OR51I1Q9H343 314 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 OLAHQ9NV23 265 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 TAS2R7Q9NYW3 318 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 GPR34Q9UPC5 381 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 ENPP4Q9Y6X5 453 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 A0A1W2PQU0 124 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 C1orf226A1L170 272 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 OXSR1O95747 527 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-220ENST00000477528 C5AR1P21730 350 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 CLK3P49761 638 aaKnown RBP13.99□□□□□ -0.17
HDAC6-220ENST00000477528 RAB28P51157 221 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 DCDC1P59894 354 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 SLAMF1Q13291 335 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 PROX2Q3B8N5 592 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 OR4C11Q6IEV9 310 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 PDZD3Q86UT5 571 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 GPR135Q8IZ08 494 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 ZNF563Q8TA94 476 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 NCSTNQ92542 709 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 KAT2AQ92830 837 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 DUS3LQ96G46 650 aaKnown RBP13.99□□□□□ -0.17
HDAC6-220ENST00000477528 SPACA7Q96KW9 195 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 KXD1Q9BQD3 176 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 ASIC5Q9NY37 505 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 SHROOM3Q8TF72 1996 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 H0YIV9 168 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 ZNF821O75541 412 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-220ENST00000477528 C1orf105O95561 183 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 CD72P21854 359 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 PDHA2P29803 388 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 BLVRAP53004 296 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 LHX8Q68G74 356 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 KIAA1161Q6NSJ0 714 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 CBLL1Q75N03 491 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 SLC22A15Q8IZD6 547 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 ZNF385DQ9H6B1 395 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 MYNNQ9NPC7 610 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 DNMT3BQ9UBC3 853 aaKnown RBP13.99□□□□□ -0.17
HDAC6-220ENST00000477528 CCL26Q9Y258 94 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 FAM240BA0A1B0GVZ2 78 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 FABP12A6NFH5 140 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 MRPS14O60783 128 aaKnown RBP13.99□□□□□ -0.17
HDAC6-220ENST00000477528 TSC22D2O75157 780 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 TNFP01375 233 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 PSMA3P25788 255 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 SPNS2Q8IVW8 549 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 OR10H4Q8NGA5 316 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 TMEM19Q96HH6 336 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 PAK1IP1Q9NWT1 392 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-220ENST00000477528 CCRL2O00421 344 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 CYP17A1P05093 508 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 FHP07954 510 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 ITGAMP11215 1152 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 ZNF234Q14588 700 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 SPARTQ8N0X7 666 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 DPH7Q9BTV6 452 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 OR51V1Q9H2C8 321 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 NDRG2Q9UN36 371 aaKnown RBP13.99□□□□□ -0.17
HDAC6-220ENST00000477528 WDR45Q9Y484 360 aa13.99□□□□□ -0.17
HDAC6-220ENST00000477528 MID1O15344 667 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 AKAP8O43823 692 aaKnown RBP13.98□□□□□ -0.17
HDAC6-220ENST00000477528 FOXD2O60548 495 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-220ENST00000477528 OR5F1O95221 314 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 GINS1Q14691 196 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 LCN1P1Q5VSP4 162 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 NIPAL1Q6NVV3 410 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 FBXO46Q6PJ61 603 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-220ENST00000477528 ZNF551Q7Z340 670 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-220ENST00000477528 OAFQ86UD1 273 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 ZNF683Q8IZ20 524 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 HMGB4Q8WW32 186 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 ECHDC3Q96DC8 303 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 GSDMCQ9BYG8 508 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 LIPT1Q9Y234 373 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 A0A1B0GW55 424 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 DAPL1A0PJW8 107 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 CPSF4LA6NMK7 179 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms