RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	TSPAN5	P62079	268 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	RPL7A	P62424	266 aa	Known RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PPP3R1	P63098	170 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PSPH	P78330	225 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CREM	Q03060	361 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	POU5F1B	Q06416	359 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PUDP	Q08623	228 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	MAP4K2	Q12851	820 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PRKG2	Q13237	762 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	NFYC	Q13952	458 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	MAD2L1BP	Q15013	274 aa	Predicted RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PGM5	Q15124	567 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	GUCA2B	Q16661	112 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PPP1R3A	Q16821	1122 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	FAM83E	Q2M2I3	478 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CTU2	Q2VPK5	515 aa	Known RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZIK1	Q3SY52	487 aa	Predicted RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	GLYR1	Q49A26	553 aa	Predicted RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ATP13A4	Q4VNC1	1196 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PDSS1	Q5T2R2	415 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	DDI2	Q5TDH0	399 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	RNLS	Q5VYX0	342 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	MFSD14C	Q5VZR4	134 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	TRIQK	Q629K1	86 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	TMEM198	Q66K66	360 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	FSTL4	Q6MZW2	842 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	C3orf33	Q6P1S2	294 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CASC4	Q6P4E1	433 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	USP17L6P	Q6QN14	398 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	FAM111B	Q6SJ93	734 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	KLHL17	Q6TDP4	642 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	UQCC3	Q6UW78	93 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	TMEM107	Q6UX40	140 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	RTL4	Q6ZR62	310 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF534	Q76KX8	674 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	BMP8A	Q7Z5Y6	402 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PTAR1	Q7Z6K3	402 aa	Predicted RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ADGRD2	Q7Z7M1	963 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC9B2	Q86UD5	537 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	TMEM17	Q86X19	198 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PSTK	Q8IV42	348 aa	Known RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CPA6	Q8N4T0	437 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CAMKK1	Q8N5S9	505 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF565	Q8N9K5	539 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ATG16L2	Q8NAA4	619 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	IL17RC	Q8NAC3	791 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PLA2G15	Q8NCC3	412 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	OR4A15	Q8NGL6	344 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	OR6M1	Q8NGM8	313 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	OR2T11	Q8NH01	316 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	RNASE11	Q8TAA1	199 aa	Known RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	RAET1E	Q8TD07	263 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	GPR151	Q8TDV0	419 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ASB13	Q8WXK3	278 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PMM1	Q92871	262 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CPNE4	Q96A23	557 aa	Predicted RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CDKN2AIPNL	Q96HQ2	116 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	MSLNL	Q96KJ4	702 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	FAM167A	Q96KS9	214 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520		Q96MT0	163 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	SPATA13	Q96N96	652 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	SEC22C	Q9BRL7	303 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	GSDMC	Q9BYG8	508 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	AMBRA1	Q9C0C7	1298 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ARHGAP39	Q9C0H5	1083 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ACTR6	Q9GZN1	396 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	TWSG1	Q9GZX9	223 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	MED28	Q9H204	178 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PPIL3	Q9H2H8	161 aa	Known RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	R3HDML	Q9H3Y0	253 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	SAV1	Q9H4B6	383 aa	Predicted RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PRDM12	Q9H4Q4	367 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	NCOR1P1	Q9H4R4	102 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	ELOVL6	Q9H5J4	265 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	DLL4	Q9NR61	685 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CHRAC1	Q9NRG0	131 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	EXD2	Q9NVH0	621 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	SDHAF2	Q9NX18	166 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	MTMR10	Q9NXD2	777 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	MED11	Q9P086	117 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	CTSF	Q9UBX1	484 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	TCEAL9	Q9UHQ7	104 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	SCP2D1	Q9UJQ7	156 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	NDRG4	Q9ULP0	352 aa	Known RBP	4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	SNX6	Q9UNH7	406 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PADI2	Q9Y2J8	665 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	PLXNA1	Q9UIW2	1896 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	MCM3AP	O60318	1980 aa		4.51	□□□□□ -1.69
PTCD3-212	ENST00000477520	KIAA0100	Q14667	2235 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520		A0A1B0GTQ1	180 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520		A0A1W2PQ09	198 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	FAM234B	A2RU67	622 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	C7orf66	A4D0T2	115 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	TRAPPC13	A5PLN9	417 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	FABP12	A6NFH5	140 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF729	A6NN14	1252 aa	Predicted RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CLCA1	A8K7I4	914 aa		4.5	□□□□□ -1.69

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