RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 FCARP24071 287 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 UCP1P25874 307 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ALDH1B1P30837 517 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PRDX2P32119 198 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PTGS2P35354 604 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 RORAP35398 523 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PTGFRP43088 359 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MAGEA9P43362 315 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MAGEA11P43364 429 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 TNFRSF4P43489 277 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 RPL21P46778 160 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 METAP2P50579 478 aaKnown RBP eCLIP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MMP15P51511 669 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CLCN5P51795 746 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MAPK12P53778 367 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 GSCP56915 257 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 RPS15P62841 145 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 TUBA1BP68363 451 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CSNK2A1P68400 391 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CYP4F2P78329 520 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 E2F1Q01094 437 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CNTN2Q02246 1040 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CFHR1Q03591 330 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 SLC3A1Q07837 685 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 IL10RBQ08334 325 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 RASGEF1BQ0VAM2 473 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ARHGEF5Q12774 1597 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ASPHQ12797 758 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MAD2L1Q13257 205 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF177Q13360 481 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 GAB1Q13480 694 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 TUBA3CQ13748 450 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ENPP2Q13822 863 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 RFTN1Q14699 578 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 LAPTM4AQ15012 233 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 TRIP10Q15642 601 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CSRP2Q16527 193 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 RBBP7Q16576 425 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PTGISQ16647 500 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 HKDC1Q2TB90 917 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CTU2Q2VPK5 515 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 DCAF4L1Q3SXM0 396 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 SPDYE7PQ495Y7 208 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 HIKESHIQ53FT3 197 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 LACTB2Q53H82 288 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CMPK2Q5EBM0 449 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ARL13AQ5H913 290 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CTSL3PQ5NE16 218 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ATF7IP2Q5U623 682 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 NKAIN2Q5VXU1 208 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ASPHD2Q6ICH7 369 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CAPRIN2Q6IMN6 1127 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 FBXO42Q6P3S6 717 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 SLC23A3Q6PIS1 610 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PRSS55Q6UWB4 352 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 LYPD4Q6UWN0 246 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 IL17RELQ6ZVW7 336 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 TUBA1AQ71U36 451 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MEPCEQ7L2J0 689 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ADGRD2Q7Z7M1 963 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 LINC00523Q86TU6 105 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 NOXA1Q86UR1 476 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 TGIF2LXQ8IUE1 241 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CBWD2Q8IUF1 395 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 UEVLDQ8IX04 471 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 OFCC1Q8IZS5 231 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 KLHL36Q8N4N3 616 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ASCC1Q8N9N2 400 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 B3GALNT2Q8NCR0 500 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MCPH1Q8NEM0 835 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CSNK2A3Q8NEV1 391 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ENGASEQ8NFI3 743 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ABHD11Q8NFV4 315 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 OR52N4Q8NGI2 321 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ANGPTL6Q8NI99 470 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 KCNG3Q8TAE7 436 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ABHD4Q8TB40 342 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PROKR1Q8TCW9 393 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PIBF1Q8WXW3 757 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ANKRD7Q92527 254 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PROX1Q92786 737 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CELF1Q92879 486 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 P2RX5Q93086 422 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 TMEM125Q96AQ2 219 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ZBTB8AQ96BR9 441 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PTCD3Q96EY7 689 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 COQ2Q96H96 371 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 BOD1Q96IK1 185 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 GPR137Q96N19 417 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ACCSQ96QU6 501 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF347Q96SE7 839 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 NPAS2Q99743 824 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CITED1Q99966 193 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 OMDQ99983 421 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 WRAP53Q9BUR4 548 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 NTMT1Q9BV86 223 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ALG8Q9BVK2 526 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 FNDC11Q9BVV2 318 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 SF3B5Q9BWJ5 86 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 IL22Q9GZX6 179 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms